Difference between revisions of "TSS:Mm 10078.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK017702:-29 ENSMUST00000193719.1:-30 AK004825:-56 ENSMUST00000075451.11:-57 M23529:-61 NM_013499:-66 uc007eev.1:-66 uc007eew.1:-66 uc007eex.1:-66 ENSMU...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Mcp= | ||
|all_trans=AK017702:-29 ENSMUST00000193719.1:-30 AK004825:-56 ENSMUST00000075451.11:-57 M23529:-61 NM_013499:-66 uc007eev.1:-66 uc007eew.1:-66 uc007eex.1:-66 ENSMUST00000191775.1:-82 ENSMUST00000192405.1:139 ENSMUST00000193094.5:150 AK134226:151 BC028945:157 ENSMUST00000193829.1:164 BC092048:166 ENSMUST00000194111.5:171 uc007eeu.1:221 M23446:221 AK160440:378 | |all_trans=AK017702:-29 ENSMUST00000193719.1:-30 AK004825:-56 ENSMUST00000075451.11:-57 M23529:-61 NM_013499:-66 uc007eev.1:-66 uc007eew.1:-66 uc007eex.1:-66 ENSMUST00000191775.1:-82 ENSMUST00000192405.1:139 ENSMUST00000193094.5:150 AK134226:151 BC028945:157 ENSMUST00000193829.1:164 BC092048:166 ENSMUST00000194111.5:171 uc007eeu.1:221 M23446:221 AK160440:378 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=71 | |distance_to_tss=71 | ||
|end=195131504 | |end=195131504 | ||
| + | |end_of_center_position=195131499 | ||
|entrez_id=12946 | |entrez_id=12946 | ||
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
| − | |gene_alias=Crry | + | |gene_alias=Crry |
|gene_description=complement component (3b/4b) receptor 1-like | |gene_description=complement component (3b/4b) receptor 1-like | ||
|gene_id=12946 | |gene_id=12946 | ||
| Line 17: | Line 19: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:88513 | |hgnc_mgi_id=MGI:88513 | ||
| + | |mCRY= | ||
|nearest_ensembl=ENSMUSG00000016481 | |nearest_ensembl=ENSMUSG00000016481 | ||
|nearest_promoter_id=NM_013499 | |nearest_promoter_id=NM_013499 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=195131493 | |start=195131493 | ||
| + | |start_of_center_position=195131498 | ||
|strand=- | |strand=- | ||
|transcript_name=AK017702 | |transcript_name=AK017702 | ||
Revision as of 07:40, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 195131498 |
|---|---|
| End of the center position in the TSS region: | 195131499 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK017702 |
|---|---|
| Distance: | -29 |
| Num_trans: | 20 |
| All_trans: | AK017702:-29 ENSMUST00000193719.1:-30 AK004825:-56 ENSMUST00000075451.11:-57 M23529:-61 NM_013499:-66 uc007eev.1:-66 uc007eew.1:-66 uc007eex.1:-66 ENSMUST00000191775.1:-82 ENSMUST00000192405.1:139 ENSMUST00000193094.5:150 AK134226:151 BC028945:157 ENSMUST00000193829.1:164 BC092048:166 ENSMUST00000194111.5:171 uc007eeu.1:221 M23446:221 AK160440:378 |
TATA-Box annotation
| Distance to TSS: | 71 |
|---|---|
| Nearest PromoterID: | NM_013499 |
| Entrez ID: | 12946 |
| Nearest Unigene: | Mm.301652 |
| Nearest Refseq: | NM_013499 |
| Nearest Ensembl: | ENSMUSG00000016481 |
| Gene Name: | complement component (3b/4b) receptor 1-like |
| Gene Alias: | Crry |
| Gene Description: | complement component (3b/4b) receptor 1-like |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
