Difference between revisions of "TSS:Mm 162648.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000193801.1:12 BC109344:12 BC109345:12 ENSMUST00000082321.8:-33 ENSMUST00000195347.5:-33 ENSMUST00000195722.1:-33 NM_007758:-33 uc007eez.1:-33...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CD21= | ||
| + | |CD35= | ||
| + | |Cr-1= | ||
| + | |Cr-2= | ||
| + | |Cr1= | ||
|all_trans=ENSMUST00000193801.1:12 BC109344:12 BC109345:12 ENSMUST00000082321.8:-33 ENSMUST00000195347.5:-33 ENSMUST00000195722.1:-33 NM_007758:-33 uc007eez.1:-33 uc007efa.1:-33 uc011wzi.1:-33 AK003072:-33 ENSMUST00000195120.5:-34 | |all_trans=ENSMUST00000193801.1:12 BC109344:12 BC109345:12 ENSMUST00000082321.8:-33 ENSMUST00000195347.5:-33 ENSMUST00000195722.1:-33 NM_007758:-33 uc007eez.1:-33 uc007efa.1:-33 uc011wzi.1:-33 AK003072:-33 ENSMUST00000195120.5:-34 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 11: | ||
|distance_to_tss=44 | |distance_to_tss=44 | ||
|end=195176682 | |end=195176682 | ||
| + | |end_of_center_position=195176671 | ||
|entrez_id=12902 | |entrez_id=12902 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| − | |gene_alias=C3DR | + | |gene_alias=C3DR |
|gene_description=complement receptor 2 | |gene_description=complement receptor 2 | ||
|gene_id=12902 | |gene_id=12902 | ||
| Line 24: | Line 30: | ||
|species=mouse | |species=mouse | ||
|start=195176659 | |start=195176659 | ||
| + | |start_of_center_position=195176670 | ||
|strand=- | |strand=- | ||
|tata_box="-80(TGCTATTTAAGG,-,0.00)" | |tata_box="-80(TGCTATTTAAGG,-,0.00)" | ||
Revision as of 07:41, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 195176670 |
|---|---|
| End of the center position in the TSS region: | 195176671 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000193801.1 BC109344 BC109345 |
|---|---|
| Distance: | 12 |
| Num_trans: | 12 |
| All_trans: | ENSMUST00000193801.1:12 BC109344:12 BC109345:12 ENSMUST00000082321.8:-33 ENSMUST00000195347.5:-33 ENSMUST00000195722.1:-33 NM_007758:-33 uc007eez.1:-33 uc007efa.1:-33 uc011wzi.1:-33 AK003072:-33 ENSMUST00000195120.5:-34 |
TATA-Box annotation
| Distance to TSS: | 44 |
|---|---|
| Nearest PromoterID: | NM_007758 |
| Entrez ID: | 12902 |
| Nearest Unigene: | Mm.235387 |
| Nearest Refseq: | NM_007758 |
| Nearest Ensembl: | ENSMUSG00000026616 |
| Gene Name: | complement receptor 2 |
| Gene Alias: | C3DR |
| Gene Description: | complement receptor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-80(TGCTATTTAAGG,-,0.00)" |
