Difference between revisions of "TSS:Mm 162649.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000082321.8:-21 ENSMUST00000195347.5:-21 ENSMUST00000195722.1:-21 NM_007758:-21 uc007eez.1:-21 uc007efa.1:-21 uc011wzi.1:-21 AK003072:-21 ENSMU...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |CD21= | ||
| + | |CD35= | ||
| + | |Cr-1= | ||
| + | |Cr-2= | ||
| + | |Cr1= | ||
|all_trans=ENSMUST00000082321.8:-21 ENSMUST00000195347.5:-21 ENSMUST00000195722.1:-21 NM_007758:-21 uc007eez.1:-21 uc007efa.1:-21 uc011wzi.1:-21 AK003072:-21 ENSMUST00000195120.5:-22 ENSMUST00000193801.1:40 BC109344:40 BC109345:40 | |all_trans=ENSMUST00000082321.8:-21 ENSMUST00000195347.5:-21 ENSMUST00000195722.1:-21 NM_007758:-21 uc007eez.1:-21 uc007efa.1:-21 uc011wzi.1:-21 AK003072:-21 ENSMUST00000195120.5:-22 ENSMUST00000193801.1:40 BC109344:40 BC109345:40 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 11: | ||
|distance_to_tss=24 | |distance_to_tss=24 | ||
|end=195176694 | |end=195176694 | ||
| + | |end_of_center_position=195176691 | ||
|entrez_id=12902 | |entrez_id=12902 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| − | |gene_alias=C3DR | + | |gene_alias=C3DR |
|gene_description=complement receptor 2 | |gene_description=complement receptor 2 | ||
|gene_id=12902 | |gene_id=12902 | ||
| Line 24: | Line 30: | ||
|species=mouse | |species=mouse | ||
|start=195176687 | |start=195176687 | ||
| + | |start_of_center_position=195176690 | ||
|strand=- | |strand=- | ||
|tata_box="-60(TGCTATTTAAGG,-,0.00)" | |tata_box="-60(TGCTATTTAAGG,-,0.00)" | ||
Revision as of 07:41, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 195176690 |
|---|---|
| End of the center position in the TSS region: | 195176691 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000082321.8 ENSMUST00000195347.5 ENSMUST00000195722.1 NM_007758 uc007eez.1 uc007efa.1 uc011wzi.1 AK003072 |
|---|---|
| Distance: | -21 |
| Num_trans: | 12 |
| All_trans: | ENSMUST00000082321.8:-21 ENSMUST00000195347.5:-21 ENSMUST00000195722.1:-21 NM_007758:-21 uc007eez.1:-21 uc007efa.1:-21 uc011wzi.1:-21 AK003072:-21 ENSMUST00000195120.5:-22 ENSMUST00000193801.1:40 BC109344:40 BC109345:40 |
TATA-Box annotation
| Distance to TSS: | 24 |
|---|---|
| Nearest PromoterID: | NM_007758 |
| Entrez ID: | 12902 |
| Nearest Unigene: | Mm.235387 |
| Nearest Refseq: | NM_007758 |
| Nearest Ensembl: | ENSMUSG00000026616 |
| Gene Name: | complement receptor 2 |
| Gene Alias: | C3DR |
| Gene Description: | complement receptor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-60(TGCTATTTAAGG,-,0.00)" |
