Difference between revisions of "TSS:Mm 10083.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000195120.5:57 ENSMUST00000082321.8:58 ENSMUST00000195347.5:58 ENSMUST00000195722.1:58 NM_007758:58 uc007eez.1:58 uc007efa.1:58 uc011wzi.1:58 A...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CD21= | ||
| + | |CD35= | ||
| + | |Cr-1= | ||
| + | |Cr-2= | ||
| + | |Cr1= | ||
|all_trans=ENSMUST00000195120.5:57 ENSMUST00000082321.8:58 ENSMUST00000195347.5:58 ENSMUST00000195722.1:58 NM_007758:58 uc007eez.1:58 uc007efa.1:58 uc011wzi.1:58 AK003072:58 ENSMUST00000193801.1:125 BC109344:125 BC109345:125 | |all_trans=ENSMUST00000195120.5:57 ENSMUST00000082321.8:58 ENSMUST00000195347.5:58 ENSMUST00000195722.1:58 NM_007758:58 uc007eez.1:58 uc007efa.1:58 uc011wzi.1:58 AK003072:58 ENSMUST00000193801.1:125 BC109344:125 BC109345:125 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 11: | ||
|distance_to_tss=-63 | |distance_to_tss=-63 | ||
|end=195176783 | |end=195176783 | ||
| + | |end_of_center_position=195176778 | ||
|entrez_id=12902 | |entrez_id=12902 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=C3DR | + | |gene_alias=C3DR |
|gene_description=complement receptor 2 | |gene_description=complement receptor 2 | ||
|gene_id=12902 | |gene_id=12902 | ||
| Line 24: | Line 30: | ||
|species=mouse | |species=mouse | ||
|start=195176772 | |start=195176772 | ||
| + | |start_of_center_position=195176777 | ||
|strand=- | |strand=- | ||
|tata_box="27(TGCTATTTAAGG,-,0.00)" | |tata_box="27(TGCTATTTAAGG,-,0.00)" | ||
Revision as of 07:41, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 195176777 |
|---|---|
| End of the center position in the TSS region: | 195176778 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000195120.5 |
|---|---|
| Distance: | 57 |
| Num_trans: | 12 |
| All_trans: | ENSMUST00000195120.5:57 ENSMUST00000082321.8:58 ENSMUST00000195347.5:58 ENSMUST00000195722.1:58 NM_007758:58 uc007eez.1:58 uc007efa.1:58 uc011wzi.1:58 AK003072:58 ENSMUST00000193801.1:125 BC109344:125 BC109345:125 |
TATA-Box annotation
| Distance to TSS: | -63 |
|---|---|
| Nearest PromoterID: | NM_007758 |
| Entrez ID: | 12902 |
| Nearest Unigene: | Mm.235387 |
| Nearest Refseq: | NM_007758 |
| Nearest Ensembl: | ENSMUSG00000026616 |
| Gene Name: | complement receptor 2 |
| Gene Alias: | C3DR |
| Gene Description: | complement receptor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "27(TGCTATTTAAGG,-,0.00)" |
