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Difference between revisions of "TSS:Hg 100942.1"

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Line 6: Line 6:
 
|distance_to_tss=-7
 
|distance_to_tss=-7
 
|end=72060617
 
|end=72060617
 +
|end_of_center_position=72060612
 
|entrez_id=138240
 
|entrez_id=138240
 
|gc_percent=0.358209
 
|gc_percent=0.358209
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=72060606
 
|start=72060606
 +
|start_of_center_position=72060611
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000377024.7 NM_001128618 uc004aip.4 BC036255
 
|transcript_name=ENST00000377024.7 NM_001128618 uc004aip.4 BC036255

Revision as of 07:42, 11 May 2019

Basic information about the TSS


TSS ID:hg_100942.1
Species:human
Chr:chr9
TSS Classification:yes
Start:72060606
End:72060617
Strand:-
TSS Score:1
Start of the center position in the TSS region:72060611
End of the center position in the TSS region:72060612



Gene and protein annotation


Transcript_name:ENST00000377024.7 NM_001128618 uc004aip.4 BC036255
Distance:2
GeneID:138240
HGNC/MGI_ID:HGNC:27037
UniProt_ID:Q5W0N0
Gene_name:chromosome 9 open reading frame 57
Gene_symbol:C9orf57
Gene_synonyms:
Gene_source:HGNC:27037



Transcript annotation


Transcript_name:ENST00000377024.7 NM_001128618 uc004aip.4 BC036255
Distance:2
Num_trans:6
All_trans:ENST00000377024.7:2 NM_001128618:2 uc004aip.4:2 BC036255:2 BC044620:24 BC053956:24



TATA-Box annotation


Distance to TSS:-7
Nearest PromoterID:NM_001128618
Entrez ID:138240
Nearest Unigene:Hs.371235
Nearest Refseq:NM_001128618
Nearest Ensembl:ENSG00000204669
Gene Name:chromosome 9 open reading frame 57
Gene Alias:-
Gene Description:chromosome 9 open reading frame 57
Gene Type:protein-coding
CpG%:0.02
GC%:0.358209
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):