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Difference between revisions of "TSS:Hg 101030.1"

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Line 8: Line 8:
 
|distance_to_tss=48
 
|distance_to_tss=48
 
|end=75088197
 
|end=75088197
 +
|end_of_center_position=75088169
 
|entrez_id=54981
 
|entrez_id=54981
 
|gc_percent=0.726368
 
|gc_percent=0.726368
|gene_alias=C9orf95|NRK1|bA235O14.2
+
|gene_alias=C9orf95
 
|gene_description=nicotinamide riboside kinase 1
 
|gene_description=nicotinamide riboside kinase 1
 
|gene_id=54981
 
|gene_id=54981
Line 26: Line 27:
 
|species=human
 
|species=human
 
|start=75088140
 
|start=75088140
 +
|start_of_center_position=75088168
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000376811.5 uc004ajs.5 AK097144 AK000566
 
|transcript_name=ENST00000376811.5 uc004ajs.5 AK097144 AK000566

Revision as of 07:59, 11 May 2019

Basic information about the TSS


TSS ID:hg_101030.1
Species:human
Chr:chr9
TSS Classification:yes
Start:75088140
End:75088197
Strand:-
TSS Score:1
Start of the center position in the TSS region:75088168
End of the center position in the TSS region:75088169



Gene and protein annotation


Transcript_name:ENST00000376811.5 uc004ajs.5 AK097144 AK000566
Distance:0
GeneID:54981
HGNC/MGI_ID:HGNC:26057
UniProt_ID:B3KUG3 Q5W125
Gene_name:nicotinamide riboside kinase 1
Gene_symbol:NMRK1
Gene_synonyms:FLJ20559 NRK1 bA235O14.2
Gene_source:HGNC:26057



Transcript annotation


Transcript_name:ENST00000376811.5 uc004ajs.5 AK097144 AK000566
Distance:0
Num_trans:21
All_trans:ENST00000376811.5:0 uc004ajs.5:0 AK097144:0 AK000566:0 ENST00000490321.1:6 uc064ttz.1:6 ENST00000361092.8:-12 ENST00000494066.1:-12 uc004ajr.5:-12 uc064ttx.1:-12 AK023413:-12 BC001366:16 ENST00000376808.8:-20 NM_017881:-20 NM_001127603:-20 NR_023352:-20 uc004ajt.4:-20 BC036804:-20 BC026243:-24 ENST00000466137.1:330 uc064tty.1:330



TATA-Box annotation


Distance to TSS:48
Nearest PromoterID:NM_001127603
Entrez ID:54981
Nearest Unigene:Hs.494186
Nearest Refseq:NM_017881
Nearest Ensembl:ENSG00000106733
Gene Name:nicotinamide riboside kinase 1
Gene Alias:C9orf95
Gene Description:nicotinamide riboside kinase 1
Gene Type:protein-coding
CpG%:0.095
GC%:0.726368
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):