Personal tools

Difference between revisions of "TSS:Hg 231511.1"

From referenceTSS

Jump to: navigation, search
(Created page with "{{TSSDetail |all_trans=KJ894812:-107 DQ892250:-107 DQ895450:-107 |chr=chr9 |cpg_percent=0.015 |distance=-107 |distance_to_tss=11429 |end=83806410 |entrez_id=80318 |gc_percent=...")
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 +
|GKAP42=
 
|all_trans=KJ894812:-107 DQ892250:-107 DQ895450:-107
 
|all_trans=KJ894812:-107 DQ892250:-107 DQ895450:-107
 
|chr=chr9
 
|chr=chr9
Line 6: Line 7:
 
|distance_to_tss=11429
 
|distance_to_tss=11429
 
|end=83806410
 
|end=83806410
 +
|end_of_center_position=83806409
 
|entrez_id=80318
 
|entrez_id=80318
 
|gc_percent=0.41791
 
|gc_percent=0.41791
|gene_alias=FKSG21|GKAP42
+
|gene_alias=FKSG21
 
|gene_description=G kinase anchoring protein 1
 
|gene_description=G kinase anchoring protein 1
 
|gene_id=80318
 
|gene_id=80318
Line 24: Line 26:
 
|species=human
 
|species=human
 
|start=83806406
 
|start=83806406
 +
|start_of_center_position=83806408
 
|strand=-
 
|strand=-
 
|transcript_name=KJ894812 DQ892250 DQ895450
 
|transcript_name=KJ894812 DQ892250 DQ895450

Revision as of 08:25, 11 May 2019

Basic information about the TSS


TSS ID:hg_231511.1
Species:human
Chr:chr9
TSS Classification:no
Start:83806406
End:83806410
Strand:-
TSS Score:1
Start of the center position in the TSS region:83806408
End of the center position in the TSS region:83806409



Gene and protein annotation


Transcript_name:KJ894812 DQ892250 DQ895450
Distance:-107
GeneID:80318
HGNC/MGI_ID:HGNC:17496
UniProt_ID:
Gene_name:G kinase anchoring protein 1
Gene_symbol:GKAP1
Gene_synonyms:FKSG21 GKAP42
Gene_source:HGNC:17496



Transcript annotation


Transcript_name:KJ894812 DQ892250 DQ895450
Distance:-107
Num_trans:3
All_trans:KJ894812:-107 DQ892250:-107 DQ895450:-107



TATA-Box annotation


Distance to TSS:11429
Nearest PromoterID:NM_025211
Entrez ID:80318
Nearest Unigene:Hs.522255
Nearest Refseq:NM_025211
Nearest Ensembl:ENSG00000165113
Gene Name:G kinase anchoring protein 1
Gene Alias:FKSG21
Gene Description:G kinase anchoring protein 1
Gene Type:protein-coding
CpG%:0.015
GC%:0.41791
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):