Difference between revisions of "TSS:Hg 101255.1"
From referenceTSS
| Line 9: | Line 9: | ||
|distance_to_tss=565 | |distance_to_tss=565 | ||
|end=87974221 | |end=87974221 | ||
| + | |end_of_center_position=87974215 | ||
|entrez_id=23552 | |entrez_id=23552 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
| − | |gene_alias=CCRK | + | |gene_alias=CCRK |
|gene_description=cyclin dependent kinase 20 | |gene_description=cyclin dependent kinase 20 | ||
|gene_id=23552 | |gene_id=23552 | ||
| Line 27: | Line 28: | ||
|species=human | |species=human | ||
|start=87974208 | |start=87974208 | ||
| + | |start_of_center_position=87974214 | ||
|strand=- | |strand=- | ||
|tata_box="-56(GTTTTTAAAACC,+,0.00)" | |tata_box="-56(GTTTTTAAAACC,+,0.00)" | ||
Revision as of 08:52, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 87974214 |
|---|---|
| End of the center position in the TSS region: | 87974215 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AY904367 KU178572 KU178573 KU178574 KU178575 KU178576 KU178577 |
|---|---|
| Distance: | -225 |
| Num_trans: | 33 |
| All_trans: | AY904367:-225 KU178572:-225 KU178573:-225 KU178574:-225 KU178575:-225 KU178576:-225 KU178577:-225 ENST00000375871.8:-266 uc004apu.4:-266 ENST00000605159.5:-284 uc022bjj.2:-284 BC002655:-284 AK298993:-302 ENST00000604175.5:-310 ENST00000605591.1:-310 uc064udg.1:-310 uc064udh.1:-310 AK296328:-310 AK075325:-312 AK294193:-312 ENST00000603475.1:-313 uc064ude.1:-313 AK226135:-313 ENST00000336654.9:-368 uc004apt.4:-368 AF035013:-458 ENST00000459720.5:-464 uc064udd.1:-464 AF113130:-464 ENST00000486228.7:-480 uc064udf.1:-480 AK291713:-480 BX647489:-488 |
TATA-Box annotation
| Distance to TSS: | 565 |
|---|---|
| Nearest PromoterID: | NM_001039803 |
| Entrez ID: | 23552 |
| Nearest Unigene: | Hs.522274 |
| Nearest Refseq: | NM_012119 |
| Nearest Ensembl: | ENSG00000156345 |
| Gene Name: | cyclin-dependent kinase 20 |
| Gene Alias: | CCRK |
| Gene Description: | cyclin dependent kinase 20 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-56(GTTTTTAAAACC,+,0.00)" |
