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Difference between revisions of "TSS:Hg 243394.1"

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(Created page with "{{TSSDetail |all_trans=NM_001278629:138 AK313867:149 ENST00000374165.5:180 uc004bho.6:180 BC033037:180 NM_152786:202 NM_001278630:203 AK301872:203 ENST00000288462.4:236 uc004b...")
 
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|distance_to_tss=-138
 
|distance_to_tss=-138
 
|end=113410506
 
|end=113410506
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|end_of_center_position=95508479
 
|entrez_id=257169
 
|entrez_id=257169
 
|gc_percent=0.656716
 
|gc_percent=0.656716
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|species=human
 
|species=human
 
|start=113410505
 
|start=113410505
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|start_of_center_position=95508478
 
|strand=+
 
|strand=+
 
|transcript_name=NM_001278629
 
|transcript_name=NM_001278629

Revision as of 09:48, 11 May 2019

Basic information about the TSS


TSS ID:hg_243394.1
Species:human
Chr:chr9
TSS Classification:yes
Start:113410505
End:113410506
Strand:+
TSS Score:1
Start of the center position in the TSS region:95508478
End of the center position in the TSS region:95508479



Gene and protein annotation


Transcript_name:NM_001278629
Distance:138
GeneID:257169
HGNC/MGI_ID:HGNC:23570
UniProt_ID:Q8TAL5
Gene_name:chromosome 9 open reading frame 43
Gene_symbol:C9orf43
Gene_synonyms:MGC17358
Gene_source:HGNC:23570



Transcript annotation


Transcript_name:NM_001278629
Distance:138
Num_trans:13
All_trans:NM_001278629:138 AK313867:149 ENST00000374165.5:180 uc004bho.6:180 BC033037:180 NM_152786:202 NM_001278630:203 AK301872:203 ENST00000288462.4:236 uc004bhp.5:236 BC026884:236 ENST00000490544.1:-452 uc064vej.1:-452



TATA-Box annotation


Distance to TSS:-138
Nearest PromoterID:NM_001278629
Entrez ID:257169
Nearest Unigene:Hs.632691
Nearest Refseq:NM_152786
Nearest Ensembl:ENSG00000157653
Gene Name:chromosome 9 open reading frame 43
Gene Alias:-
Gene Description:chromosome 9 open reading frame 43
Gene Type:protein-coding
CpG%:0.08
GC%:0.656716
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):