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Difference between revisions of "TSS:Hg 101700.1"

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Line 10: Line 10:
 
|distance_to_tss=44
 
|distance_to_tss=44
 
|end=98709157
 
|end=98709157
 +
|end_of_center_position=98709153
 
|entrez_id=9568
 
|entrez_id=9568
 
|gc_percent=0.80597
 
|gc_percent=0.80597
|gene_alias=GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099
+
|gene_alias=GABABR2
 
|gene_description=gamma-aminobutyric acid type B receptor subunit 2
 
|gene_description=gamma-aminobutyric acid type B receptor subunit 2
 
|gene_id=9568
 
|gene_id=9568
Line 28: Line 29:
 
|species=human
 
|species=human
 
|start=98709148
 
|start=98709148
 +
|start_of_center_position=98709152
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000259455.3 NM_005458 uc004ays.4 AF056085
 
|transcript_name=ENST00000259455.3 NM_005458 uc004ays.4 AF056085

Revision as of 10:11, 11 May 2019

Basic information about the TSS


TSS ID:hg_101700.1
Species:human
Chr:chr9
TSS Classification:yes
Start:98709148
End:98709157
Strand:-
TSS Score:1
Start of the center position in the TSS region:98709152
End of the center position in the TSS region:98709153



Gene and protein annotation


Transcript_name:ENST00000259455.3 NM_005458 uc004ays.4 AF056085
Distance:-40
GeneID:9568
HGNC/MGI_ID:HGNC:4507
UniProt_ID:H9NIL8 O75899
Gene_name:gamma-aminobutyric acid type B receptor subunit 2
Gene_symbol:GABBR2
Gene_synonyms:GABABR2 GPRC3B HG20
Gene_source:HGNC:4507



Transcript annotation


Transcript_name:ENST00000259455.3 NM_005458 uc004ays.4 AF056085
Distance:-40
Num_trans:12
All_trans:ENST00000259455.3:-40 NM_005458:-40 uc004ays.4:-40 AF056085:-40 BC035071:-97 AF069755:256 AF095784:338 AB384741:411 AF099033:412 AF074483:412 AJ012188:412 JQ308173:412



TATA-Box annotation


Distance to TSS:44
Nearest PromoterID:NM_005458
Entrez ID:9568
Nearest Unigene:Hs.198612
Nearest Refseq:NM_005458
Nearest Ensembl:ENSG00000136928
Gene Name:gamma-aminobutyric acid type B receptor subunit 2
Gene Alias:GABABR2
Gene Description:gamma-aminobutyric acid type B receptor subunit 2
Gene Type:protein-coding
CpG%:0.145
GC%:0.80597
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):