Difference between revisions of "TSS:Hg 101817.1"
From referenceTSS
| Line 9: | Line 9: | ||
|distance_to_tss=-64887 | |distance_to_tss=-64887 | ||
|end=104993135 | |end=104993135 | ||
| + | |end_of_center_position=104993134 | ||
|entrez_id=19 | |entrez_id=19 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| − | |gene_alias=ABC-1 | + | |gene_alias=ABC-1 |
|gene_description=ATP binding cassette subfamily A member 1 | |gene_description=ATP binding cassette subfamily A member 1 | ||
|gene_name=ABCA1 | |gene_name=ABCA1 | ||
| Line 22: | Line 23: | ||
|species=human | |species=human | ||
|start=104993131 | |start=104993131 | ||
| + | |start_of_center_position=104993133 | ||
|strand=- | |strand=- | ||
|tata_box="-36(TGCCTTATAAGA,-,0.00),-34(CCTTATAAGAAG,+,0.00),-7(GTCTCTAAGAGC,-,0.00)" | |tata_box="-36(TGCCTTATAAGA,-,0.00),-34(CCTTATAAGAAG,+,0.00),-7(GTCTCTAAGAGC,-,0.00)" | ||
Revision as of 10:41, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 104993133 |
|---|---|
| End of the center position in the TSS region: | 104993134 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -64887 |
|---|---|
| Nearest PromoterID: | NM_005502 |
| Entrez ID: | 19 |
| Nearest Unigene: | Hs.659274 |
| Nearest Refseq: | NM_005502 |
| Nearest Ensembl: | ENSG00000165029 |
| Gene Name: | ABCA1 |
| Gene Alias: | ABC-1 |
| Gene Description: | ATP binding cassette subfamily A member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-36(TGCCTTATAAGA,-,0.00),-34(CCTTATAAGAAG,+,0.00),-7(GTCTCTAAGAGC,-,0.00)" |
