Difference between revisions of "TSS:Hg 101873.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=105 | |distance_to_tss=105 | ||
|end=109013491 | |end=109013491 | ||
| + | |end_of_center_position=109013489 | ||
|entrez_id=8727 | |entrez_id=8727 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
| − | |gene_alias=ACRP | + | |gene_alias=ACRP |
|gene_description=catenin alpha like 1 | |gene_description=catenin alpha like 1 | ||
|gene_id=8727 | |gene_id=8727 | ||
| Line 26: | Line 27: | ||
|species=human | |species=human | ||
|start=109013486 | |start=109013486 | ||
| + | |start_of_center_position=109013488 | ||
|strand=- | |strand=- | ||
|transcript_name=AF030233 | |transcript_name=AF030233 | ||
Revision as of 10:59, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 109013488 |
|---|---|
| End of the center position in the TSS region: | 109013489 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AF030233 |
|---|---|
| Distance: | 1 |
| Num_trans: | 22 |
| All_trans: | AF030233:1 AF135021:3 U97067:3 AF006070:3 AF080071:6 AK314677:-7 AK223230:-8 AK022926:-8 ENST00000374593.4:-21 uc064uzg.1:-21 BC117208:24 BC117234:24 ENST00000374595.8:-31 uc004bdp.3:-31 ENST00000325551.8:-38 uc004bdo.3:-38 AK022834:-38 HQ258655:43 AB451283:45 AB451415:45 NM_001286974:-103 NM_003798:-103 |
TATA-Box annotation
| Distance to TSS: | 105 |
|---|---|
| Nearest PromoterID: | NM_001286974 |
| Entrez ID: | 8727 |
| Nearest Unigene: | Hs.58488 |
| Nearest Refseq: | NM_003798 |
| Nearest Ensembl: | ENSG00000119326 |
| Gene Name: | catenin alpha like 1 |
| Gene Alias: | ACRP |
| Gene Description: | catenin alpha like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
