Difference between revisions of "TSS:Hg 219851.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK308349:0 NR_026918:-37 AK303608:-37 |chr=chr9 |cpg_percent=0.005 |distance=0 |distance_to_tss=37 |end=109417746 |entrez_id=5774 |gc_percent=0.507463 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PTPH1= | ||
|all_trans=AK308349:0 NR_026918:-37 AK303608:-37 | |all_trans=AK308349:0 NR_026918:-37 AK303608:-37 | ||
|chr=chr9 | |chr=chr9 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=37 | |distance_to_tss=37 | ||
|end=109417746 | |end=109417746 | ||
| + | |end_of_center_position=109417746 | ||
|entrez_id=5774 | |entrez_id=5774 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
| − | |gene_alias=PTP-H1 | + | |gene_alias=PTP-H1 |
|gene_description="protein tyrosine phosphatase, non-receptor type 3" | |gene_description="protein tyrosine phosphatase, non-receptor type 3" | ||
|gene_id=5774 | |gene_id=5774 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=109417745 | |start=109417745 | ||
| + | |start_of_center_position=109417745 | ||
|strand=- | |strand=- | ||
|transcript_name=AK308349 | |transcript_name=AK308349 | ||
Revision as of 11:02, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 109417745 |
|---|---|
| End of the center position in the TSS region: | 109417746 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK308349 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3 |
| All_trans: | AK308349:0 NR_026918:-37 AK303608:-37 |
TATA-Box annotation
| Distance to TSS: | 37 |
|---|---|
| Nearest PromoterID: | NR_026918 |
| Entrez ID: | 5774 |
| Nearest Unigene: | Hs.436429 |
| Nearest Refseq: | NM_002829 |
| Nearest Ensembl: | ENSG00000070159 |
| Gene Name: | "protein tyrosine phosphatase, non-receptor type 3" |
| Gene Alias: | PTP-H1 |
| Gene Description: | "protein tyrosine phosphatase, non-receptor type 3" |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
