Difference between revisions of "TSS:Hg 101896.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=-3696 | |distance_to_tss=-3696 | ||
|end=109421490 | |end=109421490 | ||
| + | |end_of_center_position=109421480 | ||
|entrez_id=5774 | |entrez_id=5774 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
| − | |gene_alias=PTP-H1 | + | |gene_alias=PTP-H1 |
|gene_description="protein tyrosine phosphatase, non-receptor type 3" | |gene_description="protein tyrosine phosphatase, non-receptor type 3" | ||
|gene_name=PTPN3 | |gene_name=PTPN3 | ||
| Line 19: | Line 20: | ||
|species=human | |species=human | ||
|start=109421468 | |start=109421468 | ||
| + | |start_of_center_position=109421479 | ||
|strand=- | |strand=- | ||
|tata_box="-38(GGCTATTTATAG,-,0.00),-36(CTATTTATAGGT,+,0.00)" | |tata_box="-38(GGCTATTTATAG,-,0.00),-36(CTATTTATAGGT,+,0.00)" | ||
Revision as of 11:02, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 109421479 |
|---|---|
| End of the center position in the TSS region: | 109421480 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -3696 |
|---|---|
| Nearest PromoterID: | NR_026918 |
| Entrez ID: | 5774 |
| Nearest Unigene: | Hs.436429 |
| Nearest Refseq: | NM_002829 |
| Nearest Ensembl: | ENSG00000070159 |
| Gene Name: | PTPN3 |
| Gene Alias: | PTP-H1 |
| Gene Description: | "protein tyrosine phosphatase, non-receptor type 3" |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-38(GGCTATTTATAG,-,0.00),-36(CTATTTATAGGT,+,0.00)" |
