Difference between revisions of "TSS:Hg 101902.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=31 | |distance_to_tss=31 | ||
|end=109429014 | |end=109429014 | ||
| + | |end_of_center_position=109429012 | ||
|entrez_id=5774 | |entrez_id=5774 | ||
|gc_percent=0.482587 | |gc_percent=0.482587 | ||
| − | |gene_alias=PTP-H1 | + | |gene_alias=PTP-H1 |
|gene_description="protein tyrosine phosphatase, non-receptor type 3" | |gene_description="protein tyrosine phosphatase, non-receptor type 3" | ||
|gene_id=5774 | |gene_id=5774 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=109429009 | |start=109429009 | ||
| + | |start_of_center_position=109429011 | ||
|strand=- | |strand=- | ||
|tata_box="89(TTATTTAAAAGC,-,0.00)" | |tata_box="89(TTATTTAAAAGC,-,0.00)" | ||
Revision as of 11:02, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 109429011 |
|---|---|
| End of the center position in the TSS region: | 109429012 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001145372 NM_001145371 |
|---|---|
| Distance: | -29 |
| Num_trans: | 5 |
| All_trans: | NM_001145372:-29 NM_001145371:-29 AK316118:41 AK296388:41 AK296265:184 |
TATA-Box annotation
| Distance to TSS: | 31 |
|---|---|
| Nearest PromoterID: | NM_001145371 |
| Entrez ID: | 5774 |
| Nearest Unigene: | Hs.436429 |
| Nearest Refseq: | NM_002829 |
| Nearest Ensembl: | ENSG00000070159 |
| Gene Name: | "protein tyrosine phosphatase, non-receptor type 3" |
| Gene Alias: | PTP-H1 |
| Gene Description: | "protein tyrosine phosphatase, non-receptor type 3" |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "89(TTATTTAAAAGC,-,0.00)" |
