Difference between revisions of "TSS:Hg 231562.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=S39392:456 |chr=chr9 |cpg_percent=0.01 |distance=456 |distance_to_tss=-8387 |end=109437434 |entrez_id=5774 |gc_percent=0.497512 |gene_alias=PTP-H1|PTPH1...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PTPH1= | ||
|all_trans=S39392:456 | |all_trans=S39392:456 | ||
|chr=chr9 | |chr=chr9 | ||
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|distance_to_tss=-8387 | |distance_to_tss=-8387 | ||
|end=109437434 | |end=109437434 | ||
| + | |end_of_center_position=109437430 | ||
|entrez_id=5774 | |entrez_id=5774 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
| − | |gene_alias=PTP-H1 | + | |gene_alias=PTP-H1 |
|gene_description="protein tyrosine phosphatase, non-receptor type 3" | |gene_description="protein tyrosine phosphatase, non-receptor type 3" | ||
|gene_id=5774 | |gene_id=5774 | ||
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|species=human | |species=human | ||
|start=109437425 | |start=109437425 | ||
| + | |start_of_center_position=109437429 | ||
|strand=- | |strand=- | ||
|tata_box="-37(AGCCATAAAAAC,-,0.00)" | |tata_box="-37(AGCCATAAAAAC,-,0.00)" | ||
Revision as of 11:03, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 109437429 |
|---|---|
| End of the center position in the TSS region: | 109437430 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | S39392 |
|---|---|
| Distance: | 456 |
| Num_trans: | 1 |
| All_trans: | S39392:456 |
TATA-Box annotation
| Distance to TSS: | -8387 |
|---|---|
| Nearest PromoterID: | NM_001145372 |
| Entrez ID: | 5774 |
| Nearest Unigene: | Hs.436429 |
| Nearest Refseq: | NM_002829 |
| Nearest Ensembl: | ENSG00000070159 |
| Gene Name: | "protein tyrosine phosphatase, non-receptor type 3" |
| Gene Alias: | PTP-H1 |
| Gene Description: | "protein tyrosine phosphatase, non-receptor type 3" |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-37(AGCCATAAAAAC,-,0.00)" |
