Difference between revisions of "TSS:Hg 231565.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000401783.6:233 ENST00000374461.1:233 NM_153366:233 uc064vae.1:233 uc004beu.2:233 BC030816:233 AK122605:237 ENST00000374469.5:375 uc010mtz.4:375 A...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CCP22= | ||
| + | |POLYDOM= | ||
| + | |SEL-OB= | ||
| + | |SELOB= | ||
|all_trans=ENST00000401783.6:233 ENST00000374461.1:233 NM_153366:233 uc064vae.1:233 uc004beu.2:233 BC030816:233 AK122605:237 ENST00000374469.5:375 uc010mtz.4:375 AJ619977:407 AY243503:407 | |all_trans=ENST00000401783.6:233 ENST00000374461.1:233 NM_153366:233 uc064vae.1:233 uc004beu.2:233 BC030816:233 AK122605:237 ENST00000374469.5:375 uc010mtz.4:375 AJ619977:407 AY243503:407 | ||
|chr=chr9 | |chr=chr9 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=-236 | |distance_to_tss=-236 | ||
|end=110580120 | |end=110580120 | ||
| + | |end_of_center_position=110580117 | ||
|entrez_id=79987 | |entrez_id=79987 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
| − | |gene_alias=C9orf13 | + | |gene_alias=C9orf13 |
|gene_description="sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1" | |gene_description="sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1" | ||
|gene_id=79987 | |gene_id=79987 | ||
| Line 24: | Line 29: | ||
|species=human | |species=human | ||
|start=110580112 | |start=110580112 | ||
| + | |start_of_center_position=110580116 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000401783.6 ENST00000374461.1 NM_153366 uc064vae.1 uc004beu.2 BC030816 | |transcript_name=ENST00000401783.6 ENST00000374461.1 NM_153366 uc064vae.1 uc004beu.2 BC030816 | ||
Revision as of 11:13, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 110580116 |
|---|---|
| End of the center position in the TSS region: | 110580117 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000401783.6 ENST00000374461.1 NM_153366 uc064vae.1 uc004beu.2 BC030816 |
|---|---|
| Distance: | 233 |
| Num_trans: | 11 |
| All_trans: | ENST00000401783.6:233 ENST00000374461.1:233 NM_153366:233 uc064vae.1:233 uc004beu.2:233 BC030816:233 AK122605:237 ENST00000374469.5:375 uc010mtz.4:375 AJ619977:407 AY243503:407 |
TATA-Box annotation
| Distance to TSS: | -236 |
|---|---|
| Nearest PromoterID: | NM_153366 |
| Entrez ID: | 79987 |
| Nearest Unigene: | Hs.522334 |
| Nearest Refseq: | NM_153366 |
| Nearest Ensembl: | ENSG00000165124 |
| Gene Name: | "sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1" |
| Gene Alias: | C9orf13 |
| Gene Description: | "sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1" |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
