Difference between revisions of "TSS:Hg 231570.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000422125.1:-18 uc064vbc.1:-18 AK309450:26 AK091948:28 D49387:48 ENST00000374313.5:-139 uc064vbd.1:-139 AK309866:-144 AK298379:-158 ENST0000053896...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PGR1= | ||
| + | |ZADH3= | ||
|all_trans=ENST00000422125.1:-18 uc064vbc.1:-18 AK309450:26 AK091948:28 D49387:48 ENST00000374313.5:-139 uc064vbd.1:-139 AK309866:-144 AK298379:-158 ENST00000538962.5:-178 ENST00000407693.6:-178 NM_001146109:-178 NM_001146108:-178 uc011lwr.2:-178 uc004bfi.3:-178 AK289597:-178 NM_012212:242 BC035228:242 ENST00000309195.9:266 ENST00000374308.1:266 uc004bfh.3:266 uc064vbe.1:266 | |all_trans=ENST00000422125.1:-18 uc064vbc.1:-18 AK309450:26 AK091948:28 D49387:48 ENST00000374313.5:-139 uc064vbd.1:-139 AK309866:-144 AK298379:-158 ENST00000538962.5:-178 ENST00000407693.6:-178 NM_001146109:-178 NM_001146108:-178 uc011lwr.2:-178 uc004bfi.3:-178 AK289597:-178 NM_012212:242 BC035228:242 ENST00000309195.9:266 ENST00000374308.1:266 uc004bfh.3:266 uc064vbe.1:266 | ||
|chr=chr9 | |chr=chr9 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=180 | |distance_to_tss=180 | ||
|end=111599677 | |end=111599677 | ||
| + | |end_of_center_position=111599675 | ||
|entrez_id=22949 | |entrez_id=22949 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| − | |gene_alias=LTB4DH | + | |gene_alias=LTB4DH |
|gene_description=prostaglandin reductase 1 | |gene_description=prostaglandin reductase 1 | ||
|gene_id=22949 | |gene_id=22949 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=111599672 | |start=111599672 | ||
| + | |start_of_center_position=111599674 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000422125.1 uc064vbc.1 | |transcript_name=ENST00000422125.1 uc064vbc.1 | ||
Revision as of 11:23, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 111599674 |
|---|---|
| End of the center position in the TSS region: | 111599675 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000422125.1 uc064vbc.1 |
|---|---|
| Distance: | -18 |
| Num_trans: | 22 |
| All_trans: | ENST00000422125.1:-18 uc064vbc.1:-18 AK309450:26 AK091948:28 D49387:48 ENST00000374313.5:-139 uc064vbd.1:-139 AK309866:-144 AK298379:-158 ENST00000538962.5:-178 ENST00000407693.6:-178 NM_001146109:-178 NM_001146108:-178 uc011lwr.2:-178 uc004bfi.3:-178 AK289597:-178 NM_012212:242 BC035228:242 ENST00000309195.9:266 ENST00000374308.1:266 uc004bfh.3:266 uc064vbe.1:266 |
TATA-Box annotation
| Distance to TSS: | 180 |
|---|---|
| Nearest PromoterID: | NM_001146108 |
| Entrez ID: | 22949 |
| Nearest Unigene: | Hs.584864 |
| Nearest Refseq: | NM_012212 |
| Nearest Ensembl: | ENSG00000106853 |
| Gene Name: | prostaglandin reductase 1 |
| Gene Alias: | LTB4DH |
| Gene Description: | prostaglandin reductase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
