Difference between revisions of "TSS:Hg 102023.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=19 | |distance_to_tss=19 | ||
|end=111599858 | |end=111599858 | ||
| + | |end_of_center_position=111599836 | ||
|entrez_id=22949 | |entrez_id=22949 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias=LTB4DH | + | |gene_alias=LTB4DH |
|gene_description=prostaglandin reductase 1 | |gene_description=prostaglandin reductase 1 | ||
|gene_id=22949 | |gene_id=22949 | ||
| Line 26: | Line 27: | ||
|species=human | |species=human | ||
|start=111599813 | |start=111599813 | ||
| + | |start_of_center_position=111599835 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000538962.5 ENST00000407693.6 ENST00000374313.5 NM_001146109 NM_001146108 uc011lwr.2 uc004bfi.3 uc064vbd.1 AK298379 AK289597 AK309866 | |transcript_name=ENST00000538962.5 ENST00000407693.6 ENST00000374313.5 NM_001146109 NM_001146108 uc011lwr.2 uc004bfi.3 uc064vbd.1 AK298379 AK289597 AK309866 | ||
Revision as of 11:23, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 111599835 |
|---|---|
| End of the center position in the TSS region: | 111599836 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000538962.5 ENST00000407693.6 ENST00000374313.5 NM_001146109 NM_001146108 uc011lwr.2 uc004bfi.3 uc064vbd.1 AK298379 AK289597 AK309866 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22 |
| All_trans: | ENST00000538962.5:0 ENST00000407693.6:0 ENST00000374313.5:0 NM_001146109:0 NM_001146108:0 uc011lwr.2:0 uc004bfi.3:0 uc064vbd.1:0 AK298379:0 AK289597:0 AK309866:0 ENST00000422125.1:119 uc064vbc.1:119 AK309450:167 AK091948:169 D49387:189 NM_012212:383 BC035228:383 ENST00000309195.9:407 ENST00000374308.1:407 uc004bfh.3:407 uc064vbe.1:407 |
TATA-Box annotation
| Distance to TSS: | 19 |
|---|---|
| Nearest PromoterID: | NM_001146108 |
| Entrez ID: | 22949 |
| Nearest Unigene: | Hs.584864 |
| Nearest Refseq: | NM_012212 |
| Nearest Ensembl: | ENSG00000106853 |
| Gene Name: | prostaglandin reductase 1 |
| Gene Alias: | LTB4DH |
| Gene Description: | prostaglandin reductase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
