Difference between revisions of "TSS:Hg 102223.1"
From referenceTSS
| Line 13: | Line 13: | ||
|distance_to_tss=52 | |distance_to_tss=52 | ||
|end=115118212 | |end=115118212 | ||
| + | |end_of_center_position=115118206 | ||
|entrez_id=3371 | |entrez_id=3371 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
| − | |gene_alias=150-225 | + | |gene_alias=150-225 |
|gene_description=tenascin C | |gene_description=tenascin C | ||
|gene_id=3371 | |gene_id=3371 | ||
| Line 31: | Line 32: | ||
|species=human | |species=human | ||
|start=115118198 | |start=115118198 | ||
| + | |start_of_center_position=115118205 | ||
|strand=- | |strand=- | ||
|tata_box="16(CGCTATATAAGC,-,0.00)" | |tata_box="16(CGCTATATAAGC,-,0.00)" | ||
Revision as of 12:03, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 115118205 |
|---|---|
| End of the center position in the TSS region: | 115118206 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000534839.1 uc064vgz.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENST00000534839.1:0 uc064vgz.1:0 X78565:39 ENST00000535648.5:-45 ENST00000350763.8:-45 NM_002160:-45 uc022bmj.2:-45 uc004bjj.6:-45 AK304015:46 AB210038:66 |
TATA-Box annotation
| Distance to TSS: | 52 |
|---|---|
| Nearest PromoterID: | NM_002160 |
| Entrez ID: | 3371 |
| Nearest Unigene: | Hs.143250 |
| Nearest Refseq: | NM_002160 |
| Nearest Ensembl: | ENSG00000041982 |
| Gene Name: | tenascin C |
| Gene Alias: | 150-225 |
| Gene Description: | tenascin C |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "16(CGCTATATAAGC,-,0.00)" |
