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Difference between revisions of "TSS:Hg 102296.1"

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Line 8: Line 8:
 
|distance_to_tss=13
 
|distance_to_tss=13
 
|end=120580177
 
|end=120580177
 +
|end_of_center_position=120580158
 
|entrez_id=55755
 
|entrez_id=55755
 
|gc_percent=0.656716
 
|gc_percent=0.656716
−
|gene_alias=C48|Cep215|MCPH3
+
|gene_alias=C48
 
|gene_description=CDK5 regulatory subunit associated protein 2
 
|gene_description=CDK5 regulatory subunit associated protein 2
 
|gene_id=55755
 
|gene_id=55755
Line 26: Line 27:
 
|species=human
 
|species=human
 
|start=120580137
 
|start=120580137
 +
|start_of_center_position=120580157
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000360822.7 ENST00000349780.8 ENST00000360190.8 ENST00000491334.1 NM_001272039 NM_001011649 NR_073554 NR_073557 NM_018249 NR_073558 NR_073555 NR_073556 uc004bkh.2 uc004bkf.5 uc004bkg.5 uc064viw.1 KP294527 BC146782 AL833481 AB046853 BX537759 AK122913 BX537421 BX537708 BC019577
 
|transcript_name=ENST00000360822.7 ENST00000349780.8 ENST00000360190.8 ENST00000491334.1 NM_001272039 NM_001011649 NR_073554 NR_073557 NM_018249 NR_073558 NR_073555 NR_073556 uc004bkh.2 uc004bkf.5 uc004bkg.5 uc064viw.1 KP294527 BC146782 AL833481 AB046853 BX537759 AK122913 BX537421 BX537708 BC019577

Revision as of 12:20, 11 May 2019

Basic information about the TSS

TSS ID:hg_102296.1
Species:human
Chr:chr9
TSS Classification:yes
Start:120580137
End:120580177
Strand:-
TSS Score:1
Start of the center position in the TSS region:120580157
End of the center position in the TSS region:120580158



Gene and protein annotation

Transcript_name:ENST00000360822.7 ENST00000349780.8 ENST00000360190.8 ENST00000491334.1 NM_001272039 NM_001011649 NR_073554 NR_073557 NM_018249 NR_073558 NR_073555 NR_073556 uc004bkh.2 uc004bkf.5 uc004bkg.5 uc064viw.1 KP294527 BC146782 AL833481 AB046853 BX537759 AK122913 BX537421 BX537708 BC019577
Distance:0
GeneID:55755
HGNC/MGI_ID:HGNC:18672
UniProt_ID:A0A0A0MRG9 A0A0C4ZLW1 B3KVI2 Q05CZ3 Q7Z3M0 Q96SN8
Gene_name:CDK5 regulatory subunit associated protein 2
Gene_symbol:CDK5RAP2
Gene_synonyms:C48 CEP215 FLJ10867
Gene_source:HGNC:18672



Transcript annotation

Transcript_name:ENST00000360822.7 ENST00000349780.8 ENST00000360190.8 ENST00000491334.1 NM_001272039 NM_001011649 NR_073554 NR_073557 NM_018249 NR_073558 NR_073555 NR_073556 uc004bkh.2 uc004bkf.5 uc004bkg.5 uc064viw.1 KP294527 BC146782 AL833481 AB046853 BX537759 AK122913 BX537421 BX537708 BC019577
Distance:0
Num_trans:42
All_trans:ENST00000360822.7:0 ENST00000349780.8:0 ENST00000360190.8:0 ENST00000491334.1:0 NM_001272039:0 NM_001011649:0 NR_073554:0 NR_073557:0 NM_018249:0 NR_073558:0 NR_073555:0 NR_073556:0 uc004bkh.2:0 uc004bkf.5:0 uc004bkg.5:0 uc064viw.1:0 KP294527:0 BC146782:0 AL833481:0 AB046853:0 BX537759:0 AK122913:0 BX537421:0 BX537708:0 BC019577:0 AF448860:18 ENST00000481266.1:77 uc064viv.1:77 ENST00000473282.6:133 ENST00000480112.5:133 uc064vij.1:133 uc064vik.1:133 BC136275:133 BC143732:133 BC143734:133 BC143755:133 BC143760:133 BC143762:133 BC143753:133 BC143764:133 AB489151:157 DQ581824:161



TATA-Box annotation

Distance to TSS:13
Nearest PromoterID:NR_073558
Entrez ID:55755
Nearest Unigene:Hs.269560
Nearest Refseq:NM_018249
Nearest Ensembl:ENSG00000136861
Gene Name:CDK5 regulatory subunit associated protein 2
Gene Alias:C48
Gene Description:CDK5 regulatory subunit associated protein 2
Gene Type:protein-coding
CpG%:0.095
GC%:0.656716
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):
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