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Difference between revisions of "TSS:Hg 102324.1"

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Line 7: Line 7:
 
|distance_to_tss=725
 
|distance_to_tss=725
 
|end=120926187
 
|end=120926187
 +
|end_of_center_position=120926171
 
|entrez_id=7185
 
|entrez_id=7185
 
|gc_percent=0.567164
 
|gc_percent=0.567164
|gene_alias=EBI6|MGC:10353
+
|gene_alias=EBI6
 
|gene_description=TNF receptor associated factor 1
 
|gene_description=TNF receptor associated factor 1
 
|gene_id=7185
 
|gene_id=7185
Line 25: Line 26:
 
|species=human
 
|species=human
 
|start=120926153
 
|start=120926153
 +
|start_of_center_position=120926170
 
|strand=-
 
|strand=-
 
|transcript_name=BC024145
 
|transcript_name=BC024145

Revision as of 12:24, 11 May 2019

Basic information about the TSS


TSS ID:hg_102324.1
Species:human
Chr:chr9
TSS Classification:yes
Start:120926153
End:120926187
Strand:-
TSS Score:1
Start of the center position in the TSS region:120926170
End of the center position in the TSS region:120926171



Gene and protein annotation


Transcript_name:BC024145
Distance:1
GeneID:7185
HGNC/MGI_ID:HGNC:12031
UniProt_ID:
Gene_name:TNF receptor associated factor 1
Gene_symbol:TRAF1
Gene_synonyms:EBI6
Gene_source:HGNC:12031



Transcript annotation


Transcript_name:BC024145
Distance:1
Num_trans:7
All_trans:BC024145:1 U19261:4 BT019408:79 HQ447750:79 KJ897703:79 AB590501:79 CU692854:79



TATA-Box annotation


Distance to TSS:725
Nearest PromoterID:NM_005658
Entrez ID:7185
Nearest Unigene:Hs.531251
Nearest Refseq:NM_005658
Nearest Ensembl:ENSG00000056558
Gene Name:TNF receptor associated factor 1
Gene Alias:EBI6
Gene Description:TNF receptor associated factor 1
Gene Type:protein-coding
CpG%:0.005
GC%:0.567164
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):