Difference between revisions of "TSS:Hg 102329.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=45 | |distance_to_tss=45 | ||
|end=120929160 | |end=120929160 | ||
| + | |end_of_center_position=120929128 | ||
|entrez_id=7185 | |entrez_id=7185 | ||
|gc_percent=0.781095 | |gc_percent=0.781095 | ||
| − | |gene_alias=EBI6 | + | |gene_alias=EBI6 |
|gene_description=TNF receptor associated factor 1 | |gene_description=TNF receptor associated factor 1 | ||
|gene_id=7185 | |gene_id=7185 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=120929095 | |start=120929095 | ||
| + | |start_of_center_position=120929127 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000540010.1 NM_001190945 uc010mvl.2 | |transcript_name=ENST00000540010.1 NM_001190945 uc010mvl.2 | ||
Revision as of 12:24, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 120929127 |
|---|---|
| End of the center position in the TSS region: | 120929128 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000540010.1 NM_001190945 uc010mvl.2 |
|---|---|
| Distance: | -13 |
| Num_trans: | 7 |
| All_trans: | ENST00000540010.1:-13 NM_001190945:-13 uc010mvl.2:-13 AK315476:-41 ENST00000373887.7:327 uc004bku.3:327 AL832989:327 |
TATA-Box annotation
| Distance to TSS: | 45 |
|---|---|
| Nearest PromoterID: | NM_001190945 |
| Entrez ID: | 7185 |
| Nearest Unigene: | Hs.531251 |
| Nearest Refseq: | NM_005658 |
| Nearest Ensembl: | ENSG00000056558 |
| Gene Name: | TNF receptor associated factor 1 |
| Gene Alias: | EBI6 |
| Gene Description: | TNF receptor associated factor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
