Difference between revisions of "TSS:Hg 102365.1"
From referenceTSS
| Line 9: | Line 9: | ||
|distance_to_tss=48 | |distance_to_tss=48 | ||
|end=121499984 | |end=121499984 | ||
| + | |end_of_center_position=121499979 | ||
|entrez_id=2681 | |entrez_id=2681 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias=GGTA | + | |gene_alias=GGTA |
|gene_description="glycoprotein, alpha-galactosyltransferase 1 pseudogene" | |gene_description="glycoprotein, alpha-galactosyltransferase 1 pseudogene" | ||
|gene_id=2681 | |gene_id=2681 | ||
| Line 27: | Line 28: | ||
|species=human | |species=human | ||
|start=121499973 | |start=121499973 | ||
| + | |start_of_center_position=121499978 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000481799.5 NR_003191 NR_045211 | |transcript_name=ENST00000481799.5 NR_003191 NR_045211 | ||
Revision as of 12:32, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 121499978 |
|---|---|
| End of the center position in the TSS region: | 121499979 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000481799.5 NR_003191 NR_045211 |
|---|---|
| Distance: | -43 |
| Num_trans: | 10 |
| All_trans: | ENST00000481799.5:-43 NR_003191:-43 NR_045211:-43 BC045756:109 ENST00000373793.3:158 ENST00000481534.5:217 ENST00000495328.5:217 AF378121:217 AF378123:217 AF378122:217 |
TATA-Box annotation
| Distance to TSS: | 48 |
|---|---|
| Nearest PromoterID: | NR_045211 |
| Entrez ID: | 2681 |
| Nearest Unigene: | Hs.97469 |
| Nearest Refseq: | NR_003191 |
| Nearest Ensembl: | ENSG00000204136 |
| Gene Name: | "glycoprotein, alpha-galactosyltransferase 1 pseudogene; glycoprotein, alpha-galactosyltransferase 2, pseudogene" |
| Gene Alias: | GGTA |
| Gene Description: | "glycoprotein, alpha-galactosyltransferase 1 pseudogene" |
| Gene Type: | pseudo |
| CpG%: | 0.075 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
