Difference between revisions of "TSS:Hg 219881.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000560485.1:83 uc064vmi.1:83 ENST00000541397.2:86 NM_001242333:86 uc022bmx.2:86 AK297175:86 BC103936:-157 BC103937:-157 BC103938:-157 AL136570:-19...") |
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|distance_to_tss=-86 | |distance_to_tss=-86 | ||
|end=122228514 | |end=122228514 | ||
| + | |end_of_center_position=122228514 | ||
|entrez_id=26468 | |entrez_id=26468 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
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|species=human | |species=human | ||
|start=122228513 | |start=122228513 | ||
| + | |start_of_center_position=122228513 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000560485.1 uc064vmi.1 | |transcript_name=ENST00000560485.1 uc064vmi.1 | ||
Revision as of 12:37, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 122228513 |
|---|---|
| End of the center position in the TSS region: | 122228514 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000560485.1 uc064vmi.1 |
|---|---|
| Distance: | 83 |
| Num_trans: | 17 |
| All_trans: | ENST00000560485.1:83 uc064vmi.1:83 ENST00000541397.2:86 NM_001242333:86 uc022bmx.2:86 AK297175:86 BC103936:-157 BC103937:-157 BC103938:-157 AL136570:-191 NM_199160:-298 NM_014368:-298 ENST00000394319.8:-331 uc004blx.5:-331 AK299709:-331 ENST00000340587.7:-427 uc004bly.5:-427 |
TATA-Box annotation
| Distance to TSS: | -86 |
|---|---|
| Nearest PromoterID: | NM_001242333 |
| Entrez ID: | 26468 |
| Nearest Unigene: | Hs.103137 |
| Nearest Refseq: | NM_014368 |
| Nearest Ensembl: | ENSG00000106852 |
| Gene Name: | LIM homeobox 6 |
| Gene Alias: | LHX6.1 |
| Gene Description: | LIM homeobox 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
