Personal tools

Difference between revisions of "TSS:Hg 102397.1"

From referenceTSS

Jump to: navigation, search
Line 6: Line 6:
 
|distance_to_tss=129
 
|distance_to_tss=129
 
|end=122828532
 
|end=122828532
 +
|end_of_center_position=122828527
 
|entrez_id=5082
 
|entrez_id=5082
 
|gc_percent=0.641791
 
|gc_percent=0.641791
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=122828521
 
|start=122828521
 +
|start_of_center_position=122828526
 
|strand=-
 
|strand=-
 
|transcript_name=BC017227
 
|transcript_name=BC017227

Revision as of 12:40, 11 May 2019

Basic information about the TSS


TSS ID:hg_102397.1
Species:human
Chr:chr9
TSS Classification:yes
Start:122828521
End:122828532
Strand:-
TSS Score:1
Start of the center position in the TSS region:122828526
End of the center position in the TSS region:122828527



Gene and protein annotation


Transcript_name:BC017227
Distance:0
GeneID:5082
HGNC/MGI_ID:HGNC:8770
UniProt_ID:
Gene_name:phosducin like
Gene_symbol:PDCL
Gene_synonyms:DKFZp564M1863 PhLP
Gene_source:HGNC:8770



Transcript annotation


Transcript_name:BC017227
Distance:0
Num_trans:7
All_trans:BC017227:0 AL117602:-56 ENST00000259467.8:-99 uc004bmz.3:-99 AF031463:-99 NM_005388:-124 AK313429:-124



TATA-Box annotation


Distance to TSS:129
Nearest PromoterID:NM_005388
Entrez ID:5082
Nearest Unigene:Hs.271749
Nearest Refseq:NM_005388
Nearest Ensembl:ENSG00000136940
Gene Name:phosducin like
Gene Alias:PhLP
Gene Description:phosducin like
Gene Type:protein-coding
CpG%:0.08
GC%:0.641791
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):