Difference between revisions of "TSS:Hg 243106.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000524174.1:114 |chr=chr8 |cpg_percent=0.04 |distance=114 |distance_to_tss=47261 |end=23635635 |entrez_id=4824 |gc_percent=0.512438 |gene_alias=BA...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |NKX3= | ||
| + | |NKX3.1= | ||
| + | |NKX3A= | ||
|all_trans=ENST00000524174.1:114 | |all_trans=ENST00000524174.1:114 | ||
|chr=chr8 | |chr=chr8 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=47261 | |distance_to_tss=47261 | ||
|end=23635635 | |end=23635635 | ||
| + | |end_of_center_position=124861989 | ||
|entrez_id=4824 | |entrez_id=4824 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| − | |gene_alias=BAPX2 | + | |gene_alias=BAPX2 |
|gene_description=NK3 homeobox 1 | |gene_description=NK3 homeobox 1 | ||
|gene_id= | |gene_id= | ||
| Line 24: | Line 28: | ||
|species=human | |species=human | ||
|start=23635620 | |start=23635620 | ||
| + | |start_of_center_position=124861988 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000524174.1 | |transcript_name=ENST00000524174.1 | ||
Revision as of 12:51, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 124861988 |
|---|---|
| End of the center position in the TSS region: | 124861989 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000524174.1 |
|---|---|
| Distance: | 114 |
| Num_trans: | 1 |
| All_trans: | ENST00000524174.1:114 |
TATA-Box annotation
| Distance to TSS: | 47261 |
|---|---|
| Nearest PromoterID: | NM_001256339 |
| Entrez ID: | 4824 |
| Nearest Unigene: | Hs.55999 |
| Nearest Refseq: | NM_006167 |
| Nearest Ensembl: | ENSG00000167034 |
| Gene Name: | "family with sequence similarity 60 member D, pseudogene" |
| Gene Alias: | BAPX2 |
| Gene Description: | NK3 homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
