Difference between revisions of "TSS:Hg 102472.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=23 | |distance_to_tss=23 | ||
|end=125189923 | |end=125189923 | ||
| + | |end_of_center_position=125189916 | ||
|entrez_id=5537 | |entrez_id=5537 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
| − | |gene_alias=PP6 | + | |gene_alias=PP6 |
|gene_description=protein phosphatase 6 catalytic subunit | |gene_description=protein phosphatase 6 catalytic subunit | ||
|gene_id=5537 | |gene_id=5537 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=125189908 | |start=125189908 | ||
| + | |start_of_center_position=125189915 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000451402.5 ENST00000415905.5 NM_001123355 NM_001123369 NM_002721 uc010mww.4 uc010mwv.4 | |transcript_name=ENST00000451402.5 ENST00000415905.5 NM_001123355 NM_001123369 NM_002721 uc010mww.4 uc010mwv.4 | ||
Revision as of 12:53, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 125189915 |
|---|---|
| End of the center position in the TSS region: | 125189916 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000451402.5 ENST00000415905.5 NM_001123355 NM_001123369 NM_002721 uc010mww.4 uc010mwv.4 |
|---|---|
| Distance: | -16 |
| Num_trans: | 24 |
| All_trans: | ENST00000451402.5:-16 ENST00000415905.5:-16 NM_001123355:-16 NM_001123369:-16 NM_002721:-16 uc010mww.4:-16 uc010mwv.4:-16 ENST00000373547.8:91 uc004bpg.5:91 AK299087:106 AK295190:106 AK316527:117 BC006990:123 ENST00000456642.1:126 uc064vrc.1:126 AK312332:138 AK295752:150 X92972:170 AF035158:191 KJ891876:191 BT019708:191 AB385530:191 KU178271:191 KU178272:191 |
TATA-Box annotation
| Distance to TSS: | 23 |
|---|---|
| Nearest PromoterID: | NM_002721 |
| Entrez ID: | 5537 |
| Nearest Unigene: | Hs.744091 |
| Nearest Refseq: | NM_002721 |
| Nearest Ensembl: | ENSG00000119414 |
| Gene Name: | protein phosphatase 6 catalytic subunit |
| Gene Alias: | PP6 |
| Gene Description: | protein phosphatase 6 catalytic subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
