Difference between revisions of "TSS:Hg 102508.1"
From referenceTSS
| Line 10: | Line 10: | ||
|distance_to_tss=72 | |distance_to_tss=72 | ||
|end=125707164 | |end=125707164 | ||
| + | |end_of_center_position=125707162 | ||
|entrez_id=79109 | |entrez_id=79109 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias=JC310 | + | |gene_alias=JC310 |
|gene_description=mitogen-activated protein kinase associated protein 1 | |gene_description=mitogen-activated protein kinase associated protein 1 | ||
|gene_id=79109 | |gene_id=79109 | ||
| Line 28: | Line 29: | ||
|species=human | |species=human | ||
|start=125707159 | |start=125707159 | ||
| + | |start_of_center_position=125707161 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000427078.5 uc064vse.1 | |transcript_name=ENST00000427078.5 uc064vse.1 | ||
Revision as of 12:58, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 125707161 |
|---|---|
| End of the center position in the TSS region: | 125707162 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000427078.5 uc064vse.1 |
|---|---|
| Distance: | -13 |
| Num_trans: | 36 |
| All_trans: | ENST00000427078.5:-13 uc064vse.1:-13 AK290060:-27 AL833042:-31 ENST00000373496.3:-34 uc064vsj.1:-34 AY633624:-37 AY633625:-37 AY633626:-37 ENST00000433483.1:-38 uc064vsk.1:-38 ENST00000350766.7:-39 uc004bpy.4:-39 BC002326:-39 BC003044:-39 ENST00000373503.7:-48 uc004bpw.4:-48 ENST00000373511.6:-67 ENST00000394060.7:-67 uc004bpz.4:-67 uc004bqa.5:-67 AY524429:-67 AY524431:-67 AY524432:-67 AY524430:-67 ENST00000265960.7:-70 ENST00000394063.5:-70 NM_001006621:-70 NM_001006617:-70 NM_024117:-70 NM_001006619:-70 NM_001006620:-70 NM_001006618:-70 uc004bpv.3:-70 uc004bpx.3:-70 M37191:156 |
TATA-Box annotation
| Distance to TSS: | 72 |
|---|---|
| Nearest PromoterID: | NM_001006617 |
| Entrez ID: | 79109 |
| Nearest Unigene: | Hs.495138 |
| Nearest Refseq: | NM_024117 |
| Nearest Ensembl: | ENSG00000119487 |
| Gene Name: | mitogen-activated protein kinase associated protein 1 |
| Gene Alias: | JC310 |
| Gene Description: | mitogen-activated protein kinase associated protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
