Difference between revisions of "TSS:Hg 102659.1"
From referenceTSS
| Line 9: | Line 9: | ||
|distance_to_tss=453 | |distance_to_tss=453 | ||
|end=128127759 | |end=128127759 | ||
| + | |end_of_center_position=128127736 | ||
|entrez_id=80142 | |entrez_id=80142 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
| − | |gene_alias=C9orf15 | + | |gene_alias=C9orf15 |
|gene_description=prostaglandin E synthase 2 | |gene_description=prostaglandin E synthase 2 | ||
|gene_id=80142 | |gene_id=80142 | ||
| Line 28: | Line 29: | ||
|species=human | |species=human | ||
|start=128127711 | |start=128127711 | ||
| + | |start_of_center_position=128127735 | ||
|strand=- | |strand=- | ||
|tata_box="-52(CCCTTTAAACGC,+,0.00),-51(CCTTTAAACGCC,+,0.00)" | |tata_box="-52(CCCTTTAAACGC,+,0.00),-51(CCTTTAAACGCC,+,0.00)" | ||
Revision as of 13:31, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 128127735 |
|---|---|
| End of the center position in the TSS region: | 128127736 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000496594.5 ENST00000449878.1 uc064waq.1 uc064wav.1 BC009456 AK024100 AK223520 KJ905547 DQ891904 DQ895090 AB463194 AM392565 |
|---|---|
| Distance: | 0 |
| Num_trans: | 27 |
| All_trans: | ENST00000496594.5:0 ENST00000449878.1:0 uc064waq.1:0 uc064wav.1:0 BC009456:0 AK024100:0 AK223520:0 KJ905547:0 DQ891904:0 DQ895090:0 AB463194:0 AM392565:0 ENST00000485510.5:1 uc064waz.1:1 ENST00000483625.5:3 uc064wax.1:3 BC009397:15 ENST00000474124.5:37 uc064wau.1:37 BC011613:-138 ENST00000485237.1:-355 uc064wba.1:-355 ENST00000487063.5:-387 uc064wat.1:-387 ENST00000617202.4:-429 NM_001256335:-429 uc031tff.2:-429 |
TATA-Box annotation
| Distance to TSS: | 453 |
|---|---|
| Nearest PromoterID: | NM_001256335 |
| Entrez ID: | 80142 |
| Nearest Unigene: | Hs.495219 |
| Nearest Refseq: | NM_025072 |
| Nearest Ensembl: | ENSG00000148334 |
| Gene Name: | prostaglandin E synthase 2 |
| Gene Alias: | C9orf15 |
| Gene Description: | prostaglandin E synthase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-52(CCCTTTAAACGC,+,0.00),-51(CCTTTAAACGCC,+,0.00)" |
