Difference between revisions of "TSS:Hg 102663.1"
From referenceTSS
| Line 9: | Line 9: | ||
|distance_to_tss=45 | |distance_to_tss=45 | ||
|end=128128451 | |end=128128451 | ||
| + | |end_of_center_position=128128418 | ||
|entrez_id=80142 | |entrez_id=80142 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias=C9orf15 | + | |gene_alias=C9orf15 |
|gene_description=prostaglandin E synthase 2 | |gene_description=prostaglandin E synthase 2 | ||
|gene_id=80142 | |gene_id=80142 | ||
| Line 28: | Line 29: | ||
|species=human | |species=human | ||
|start=128128383 | |start=128128383 | ||
| + | |start_of_center_position=128128417 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000476748.5 ENST00000497109.5 uc064waw.1 uc064way.1 AK301618 | |transcript_name=ENST00000476748.5 ENST00000497109.5 uc064waw.1 uc064way.1 AK301618 | ||
Revision as of 13:31, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 128128417 |
|---|---|
| End of the center position in the TSS region: | 128128418 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000476748.5 ENST00000497109.5 uc064waw.1 uc064way.1 AK301618 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000476748.5:0 ENST00000497109.5:0 uc064waw.1:0 uc064way.1:0 AK301618:0 ENST00000338961.10:-11 ENST00000277462.9:-11 NM_198938:-11 NM_025072:-11 uc004bti.4:-11 uc004btk.5:-11 AK057049:-11 ENST00000617202.4:196 NM_001256335:196 uc031tff.2:196 ENST00000487063.5:238 uc064wat.1:238 ENST00000485237.1:270 uc064wba.1:270 BC011613:487 |
TATA-Box annotation
| Distance to TSS: | 45 |
|---|---|
| Nearest PromoterID: | NM_025072 |
| Entrez ID: | 80142 |
| Nearest Unigene: | Hs.495219 |
| Nearest Refseq: | NM_025072 |
| Nearest Ensembl: | ENSG00000148334 |
| Gene Name: | prostaglandin E synthase 2 |
| Gene Alias: | C9orf15 |
| Gene Description: | prostaglandin E synthase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
