Difference between revisions of "TSS:Hg 102721.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=139 | |distance_to_tss=139 | ||
|end=129028240 | |end=129028240 | ||
| + | |end_of_center_position=129028214 | ||
|entrez_id=56904 | |entrez_id=56904 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
| − | |gene_alias=PP6569 | + | |gene_alias=PP6569 |
|gene_description=SH3 domain containing GRB2 like endophilin B2 | |gene_description=SH3 domain containing GRB2 like endophilin B2 | ||
|gene_id=56904 | |gene_id=56904 | ||
| Line 26: | Line 27: | ||
|species=human | |species=human | ||
|start=129028187 | |start=129028187 | ||
| + | |start_of_center_position=129028213 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000372559.5 ENST00000416629.5 ENST00000416230.1 uc033diq.2 uc064wii.1 uc064win.1 AF257319 | |transcript_name=ENST00000372559.5 ENST00000416629.5 ENST00000416230.1 uc033diq.2 uc064wii.1 uc064win.1 AF257319 | ||
Revision as of 13:52, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 129028213 |
|---|---|
| End of the center position in the TSS region: | 129028214 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000372559.5 ENST00000416629.5 ENST00000416230.1 uc033diq.2 uc064wii.1 uc064win.1 AF257319 |
|---|---|
| Distance: | 0 |
| Num_trans: | 27 |
| All_trans: | ENST00000372559.5:0 ENST00000416629.5:0 ENST00000416230.1:0 uc033diq.2:0 uc064wii.1:0 uc064win.1:0 AF257319:0 ENST00000417224.5:3 uc064wih.1:3 AF258589:-26 AB384306:32 EU832345:32 EU832430:32 KJ894359:33 ENST00000372554.8:-39 uc004bww.5:-39 AB058751:-39 ENST00000483980.5:-55 uc064wik.1:-55 ENST00000372564.7:-60 uc004bwv.5:-60 BC014635:-60 ENST00000455407.5:-63 uc064wij.1:-63 NM_001287046:-113 NM_001287045:-113 NM_020145:-113 |
TATA-Box annotation
| Distance to TSS: | 139 |
|---|---|
| Nearest PromoterID: | NM_020145 |
| Entrez ID: | 56904 |
| Nearest Unigene: | Hs.460238 |
| Nearest Refseq: | NM_020145 |
| Nearest Ensembl: | ENSG00000148341 |
| Gene Name: | SH3-domain GRB2-like endophilin B2 |
| Gene Alias: | PP6569 |
| Gene Description: | SH3 domain containing GRB2 like endophilin B2 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
