Personal tools

Difference between revisions of "TSS:Hg 102734.1"

From referenceTSS

Jump to: navigation, search
Line 8: Line 8:
 
|distance_to_tss=-2
 
|distance_to_tss=-2
 
|end=129111317
 
|end=129111317
 +
|end_of_center_position=129111312
 
|entrez_id=5524
 
|entrez_id=5524
 
|gc_percent=0.741294
 
|gc_percent=0.741294
|gene_alias=PP2A|PPP2R4|PR53
+
|gene_alias=PP2A
 
|gene_description=protein phosphatase 2 phosphatase activator
 
|gene_description=protein phosphatase 2 phosphatase activator
 
|gene_id=1384
 
|gene_id=1384
Line 26: Line 27:
 
|species=human
 
|species=human
 
|start=129111306
 
|start=129111306
 +
|start_of_center_position=129111311
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000464290.5 uc064wji.1
 
|transcript_name=ENST00000464290.5 uc064wji.1

Revision as of 13:55, 11 May 2019

Basic information about the TSS


TSS ID:hg_102734.1
Species:human
Chr:chr9
TSS Classification:yes
Start:129111306
End:129111317
Strand:-
TSS Score:1
Start of the center position in the TSS region:129111311
End of the center position in the TSS region:129111312



Gene and protein annotation


Transcript_name:ENST00000464290.5 uc064wji.1
Distance:118
GeneID:1384
HGNC/MGI_ID:HGNC:2342
UniProt_ID:
Gene_name:carnitine O-acetyltransferase
Gene_symbol:CRAT
Gene_synonyms:CAT1
Gene_source:HGNC:2342



Transcript annotation


Transcript_name:ENST00000464290.5 uc064wji.1
Distance:118
Num_trans:2
All_trans:ENST00000464290.5:118 uc064wji.1:118



TATA-Box annotation


Distance to TSS:-2
Nearest PromoterID:NM_178003
Entrez ID:5524
Nearest Unigene:Hs.400740
Nearest Refseq:NM_021131
Nearest Ensembl:ENSG00000119383
Gene Name:carnitine O-acetyltransferase
Gene Alias:PP2A
Gene Description:protein phosphatase 2 phosphatase activator
Gene Type:protein-coding
CpG%:0.175
GC%:0.741294
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):