Difference between revisions of "TSS:Hg 102770.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=20 | |distance_to_tss=20 | ||
|end=129835296 | |end=129835296 | ||
| + | |end_of_center_position=129835274 | ||
|entrez_id=51759 | |entrez_id=51759 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
| − | |gene_alias=HCA59 | + | |gene_alias=HCA59 |
|gene_description=chromosome 9 open reading frame 78 | |gene_description=chromosome 9 open reading frame 78 | ||
|gene_id=51759 | |gene_id=51759 | ||
| Line 26: | Line 27: | ||
|species=human | |species=human | ||
|start=129835250 | |start=129835250 | ||
| + | |start_of_center_position=129835273 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000372447.7 ENST00000615599.4 ENST00000461349.5 ENST00000492991.5 NM_016520 uc004byp.4 uc064wmb.1 uc064wmc.1 uc064wmf.1 AK057004 AF151054 | |transcript_name=ENST00000372447.7 ENST00000615599.4 ENST00000461349.5 ENST00000492991.5 NM_016520 uc004byp.4 uc064wmb.1 uc064wmc.1 uc064wmf.1 AK057004 AF151054 | ||
Revision as of 14:06, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 129835273 |
|---|---|
| End of the center position in the TSS region: | 129835274 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000372447.7 ENST00000615599.4 ENST00000461349.5 ENST00000492991.5 NM_016520 uc004byp.4 uc064wmb.1 uc064wmc.1 uc064wmf.1 AK057004 AF151054 |
|---|---|
| Distance: | 0 |
| Num_trans: | 18 |
| All_trans: | ENST00000372447.7:0 ENST00000615599.4:0 ENST00000461349.5:0 ENST00000492991.5:0 NM_016520:0 uc004byp.4:0 uc064wmb.1:0 uc064wmc.1:0 uc064wmf.1:0 AK057004:0 AF151054:0 BC017570:4 BC007664:5 AF218421:8 KJ893985:29 KJ906186:29 CU675747:29 CU676010:29 |
TATA-Box annotation
| Distance to TSS: | 20 |
|---|---|
| Nearest PromoterID: | NM_016520 |
| Entrez ID: | 51759 |
| Nearest Unigene: | Hs.278429 |
| Nearest Refseq: | NM_016520 |
| Nearest Ensembl: | ENSG00000136819 |
| Gene Name: | chromosome 9 open reading frame 78 |
| Gene Alias: | HCA59 |
| Gene Description: | chromosome 9 open reading frame 78 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
