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Difference between revisions of "TSS:Hg 102823.1"

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Line 6: Line 6:
 
|distance_to_tss=5981
 
|distance_to_tss=5981
 
|end=131270565
 
|end=131270565
 +
|end_of_center_position=131270539
 
|entrez_id=286336
 
|entrez_id=286336
 
|gc_percent=0.606965
 
|gc_percent=0.606965
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=131270511
 
|start=131270511
 +
|start_of_center_position=131270538
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000464831.1 uc064wqk.1
 
|transcript_name=ENST00000464831.1 uc064wqk.1

Revision as of 14:23, 11 May 2019

Basic information about the TSS


TSS ID:hg_102823.1
Species:human
Chr:chr9
TSS Classification:yes
Start:131270511
End:131270565
Strand:-
TSS Score:1
Start of the center position in the TSS region:131270538
End of the center position in the TSS region:131270539



Gene and protein annotation


Transcript_name:ENST00000464831.1 uc064wqk.1
Distance:0
GeneID:286336
HGNC/MGI_ID:HGNC:25465
UniProt_ID:Q5JUQ1
Gene_name:family with sequence similarity 78 member A
Gene_symbol:FAM78A
Gene_synonyms:FLJ00024
Gene_source:HGNC:25465



Transcript annotation


Transcript_name:ENST00000464831.1 uc064wqk.1
Distance:0
Num_trans:5
All_trans:ENST00000464831.1:0 uc064wqk.1:0 ENST00000372269.7:19 uc004caj.4:19 BC037559:19



TATA-Box annotation


Distance to TSS:5981
Nearest PromoterID:NM_033387
Entrez ID:286336
Nearest Unigene:Hs.143878
Nearest Refseq:NM_033387
Nearest Ensembl:ENSG00000126882
Gene Name:family with sequence similarity 78 member A
Gene Alias:C9orf59
Gene Description:family with sequence similarity 78 member A
Gene Type:protein-coding
CpG%:0.02
GC%:0.606965
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):