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Difference between revisions of "TSS:Hg 102827.1"

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Line 6: Line 6:
 
|distance_to_tss=9
 
|distance_to_tss=9
 
|end=131276520
 
|end=131276520
 +
|end_of_center_position=131276510
 
|entrez_id=286336
 
|entrez_id=286336
 
|gc_percent=0.60199
 
|gc_percent=0.60199
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=131276499
 
|start=131276499
 +
|start_of_center_position=131276509
 
|strand=-
 
|strand=-
 
|transcript_name=NM_033387 BC049388
 
|transcript_name=NM_033387 BC049388

Revision as of 14:23, 11 May 2019

Basic information about the TSS


TSS ID:hg_102827.1
Species:human
Chr:chr9
TSS Classification:yes
Start:131276499
End:131276520
Strand:-
TSS Score:1
Start of the center position in the TSS region:131276509
End of the center position in the TSS region:131276510



Gene and protein annotation


Transcript_name:NM_033387 BC049388
Distance:0
GeneID:286336
HGNC/MGI_ID:HGNC:25465
UniProt_ID:Q8N2W3
Gene_name:family with sequence similarity 78 member A
Gene_symbol:FAM78A
Gene_synonyms:FLJ00024
Gene_source:HGNC:25465



Transcript annotation


Transcript_name:NM_033387 BC049388
Distance:0
Num_trans:10
All_trans:NM_033387:0 BC049388:0 ENST00000372271.3:-27 uc004cak.4:-27 AK095423:-27 BC152842:321 BC156765:321 AB528860:321 CU690620:379 KJ904173:380



TATA-Box annotation


Distance to TSS:9
Nearest PromoterID:NM_033387
Entrez ID:286336
Nearest Unigene:Hs.143878
Nearest Refseq:NM_033387
Nearest Ensembl:ENSG00000126882
Gene Name:family with sequence similarity 78 member A
Gene Alias:C9orf59
Gene Description:family with sequence similarity 78 member A
Gene Type:protein-coding
CpG%:0.085
GC%:0.60199
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):