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Difference between revisions of "TSS:Hg 102830.1"

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Line 6: Line 6:
 
|distance_to_tss=-481
 
|distance_to_tss=-481
 
|end=131277015
 
|end=131277015
 +
|end_of_center_position=131277000
 
|entrez_id=286336
 
|entrez_id=286336
 
|gc_percent=0.766169
 
|gc_percent=0.766169
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=131276984
 
|start=131276984
 +
|start_of_center_position=131276999
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000372271.3 uc004cak.4 AK095423
 
|transcript_name=ENST00000372271.3 uc004cak.4 AK095423

Revision as of 14:23, 11 May 2019

Basic information about the TSS


TSS ID:hg_102830.1
Species:human
Chr:chr9
TSS Classification:no
Start:131276984
End:131277015
Strand:-
TSS Score:1
Start of the center position in the TSS region:131276999
End of the center position in the TSS region:131277000



Gene and protein annotation


Transcript_name:ENST00000372271.3 uc004cak.4 AK095423
Distance:438
GeneID:286336
HGNC/MGI_ID:HGNC:25465
UniProt_ID:Q5JUQ0
Gene_name:family with sequence similarity 78 member A
Gene_symbol:FAM78A
Gene_synonyms:FLJ00024
Gene_source:HGNC:25465



Transcript annotation


Transcript_name:ENST00000372271.3 uc004cak.4 AK095423
Distance:438
Num_trans:5
All_trans:ENST00000372271.3:438 uc004cak.4:438 AK095423:438 NM_033387:466 BC049388:466



TATA-Box annotation


Distance to TSS:-481
Nearest PromoterID:NM_033387
Entrez ID:286336
Nearest Unigene:Hs.143878
Nearest Refseq:NM_033387
Nearest Ensembl:ENSG00000126882
Gene Name:family with sequence similarity 78 member A
Gene Alias:C9orf59
Gene Description:family with sequence similarity 78 member A
Gene Type:protein-coding
CpG%:0.15
GC%:0.766169
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):