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Difference between revisions of "TSS:Hg 102840.1"

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Line 7: Line 7:
 
|distance_to_tss=87837
 
|distance_to_tss=87837
 
|end=131622015
 
|end=131622015
 +
|end_of_center_position=131622005
 
|entrez_id=2889
 
|entrez_id=2889
 
|gc_percent=0.59204
 
|gc_percent=0.59204
|gene_alias=C3G|GRF2
+
|gene_alias=C3G
 
|gene_description=Rap guanine nucleotide exchange factor 1
 
|gene_description=Rap guanine nucleotide exchange factor 1
 
|gene_id=2889
 
|gene_id=2889
Line 25: Line 26:
 
|species=human
 
|species=human
 
|start=131621994
 
|start=131621994
 +
|start_of_center_position=131622004
 
|strand=-
 
|strand=-
 
|transcript_name=DQ925677 DQ925678 DQ925679 DQ925680 DQ925681 DQ925682 DQ925683 DQ925684
 
|transcript_name=DQ925677 DQ925678 DQ925679 DQ925680 DQ925681 DQ925682 DQ925683 DQ925684

Revision as of 14:27, 11 May 2019

Basic information about the TSS


TSS ID:hg_102840.1
Species:human
Chr:chr9
TSS Classification:no
Start:131621994
End:131622015
Strand:-
TSS Score:1
Start of the center position in the TSS region:131622004
End of the center position in the TSS region:131622005



Gene and protein annotation


Transcript_name:DQ925677 DQ925678 DQ925679 DQ925680 DQ925681 DQ925682 DQ925683 DQ925684
Distance:104
GeneID:2889
HGNC/MGI_ID:HGNC:4568
UniProt_ID:A5XEI4 A5XEI5 A5XEI6 A5XEI7 A5XEI8 A5XEI9 A5XEJ0 A5XEJ1
Gene_name:Rap guanine nucleotide exchange factor 1
Gene_symbol:RAPGEF1
Gene_synonyms:C3G
Gene_source:HGNC:4568



Transcript annotation


Transcript_name:DQ925677 DQ925678 DQ925679 DQ925680 DQ925681 DQ925682 DQ925683 DQ925684
Distance:104
Num_trans:10
All_trans:DQ925677:104 DQ925678:104 DQ925679:104 DQ925680:104 DQ925681:104 DQ925682:104 DQ925683:104 DQ925684:104 ENST00000414781.1:157 uc064wrn.1:157



TATA-Box annotation


Distance to TSS:87837
Nearest PromoterID:NM_198679
Entrez ID:2889
Nearest Unigene:Hs.127897
Nearest Refseq:NM_005312
Nearest Ensembl:ENSG00000107263
Gene Name:Rap guanine nucleotide exchange factor 1
Gene Alias:C3G
Gene Description:Rap guanine nucleotide exchange factor 1
Gene Type:protein-coding
CpG%:0.03
GC%:0.59204
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):