Difference between revisions of "TSS:Hg 102918.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=40 | |distance_to_tss=40 | ||
|end=132944599 | |end=132944599 | ||
| + | |end_of_center_position=132944594 | ||
|entrez_id=7248 | |entrez_id=7248 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| − | |gene_alias=LAM | + | |gene_alias=LAM |
|gene_description=tuberous sclerosis 1 | |gene_description=tuberous sclerosis 1 | ||
|gene_id=7248 | |gene_id=7248 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=132944587 | |start=132944587 | ||
| + | |start_of_center_position=132944593 | ||
|strand=- | |strand=- | ||
|tata_box="74(TCCTTTTTATGG,-,0.00),76(CTTTTTATGGGG,+,0.00)" | |tata_box="74(TCCTTTTTATGG,-,0.00),76(CTTTTTATGGGG,+,0.00)" | ||
Revision as of 14:40, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 132944593 |
|---|---|
| End of the center position in the TSS region: | 132944594 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000493467.5 uc064wst.1 AB190910 BC121000 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23 |
| All_trans: | ENST00000493467.5:0 uc064wst.1:0 AB190910:0 BC121000:0 BC047772:-7 AK303030:-17 AK308412:-17 ENST00000475903.5:-20 uc064wsv.1:-20 AK297326:-20 ENST00000298552.7:-22 ENST00000490179.2:-22 uc004cca.3:-22 uc064wsw.1:-22 AF013168:-22 BC108668:-24 ENST00000403810.5:-34 NM_001162426:-34 NM_000368:-34 NM_001162427:-34 uc004cce.2:-34 AK299654:-34 BC070032:-34 |
TATA-Box annotation
| Distance to TSS: | 40 |
|---|---|
| Nearest PromoterID: | NM_001162426 |
| Entrez ID: | 7248 |
| Nearest Unigene: | Hs.370854 |
| Nearest Refseq: | NM_000368 |
| Nearest Ensembl: | ENSG00000165699 |
| Gene Name: | tuberous sclerosis 1 |
| Gene Alias: | LAM |
| Gene Description: | tuberous sclerosis 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "74(TCCTTTTTATGG,-,0.00),76(CTTTTTATGGGG,+,0.00)" |
