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Difference between revisions of "TSS:Hg 102984.1"

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Line 6: Line 6:
 
|distance_to_tss=-26
 
|distance_to_tss=-26
 
|end=133336239
 
|end=133336239
 +
|end_of_center_position=133336236
 
|entrez_id=6838
 
|entrez_id=6838
 
|gc_percent=0.721393
 
|gc_percent=0.721393
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=133336232
 
|start=133336232
 +
|start_of_center_position=133336235
 
|strand=-
 
|strand=-
 
|transcript_name=NR_103874 NM_006753 NM_001278942
 
|transcript_name=NR_103874 NM_006753 NM_001278942

Revision as of 14:56, 11 May 2019

Basic information about the TSS


TSS ID:hg_102984.1
Species:human
Chr:chr9
TSS Classification:yes
Start:133336232
End:133336239
Strand:-
TSS Score:1
Start of the center position in the TSS region:133336235
End of the center position in the TSS region:133336236



Gene and protein annotation


Transcript_name:NR_103874 NM_006753 NM_001278942
Distance:23
GeneID:6838
HGNC/MGI_ID:HGNC:11478
UniProt_ID:O75683
Gene_name:surfeit 6
Gene_symbol:SURF6
Gene_synonyms:FLJ30322 RRP14
Gene_source:HGNC:11478



Transcript annotation


Transcript_name:NR_103874 NM_006753 NM_001278942
Distance:23
Num_trans:12
All_trans:NR_103874:23 NM_006753:23 NM_001278942:23 AK054884:26 BC014878:72 EU831789:92 EU831867:92 BC003001:96 BC006197:96 KJ892233:100 ENST00000372022.5:-159 uc004cdb.6:-159



TATA-Box annotation


Distance to TSS:-26
Nearest PromoterID:NM_006753
Entrez ID:6838
Nearest Unigene:Hs.274430
Nearest Refseq:NM_006753
Nearest Ensembl:ENSG00000148296
Gene Name:surfeit 6
Gene Alias:RRP14
Gene Description:surfeit 6
Gene Type:protein-coding
CpG%:0.15
GC%:0.721393
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):