Difference between revisions of "TSS:Hg 103000.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=113 | |distance_to_tss=113 | ||
|end=133417999 | |end=133417999 | ||
| + | |end_of_center_position=133417983 | ||
|entrez_id=57109 | |entrez_id=57109 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| − | |gene_alias=REX4 | + | |gene_alias=REX4 |
|gene_description="REX4 homolog, 3'-5' exonuclease" | |gene_description="REX4 homolog, 3'-5' exonuclease" | ||
|gene_id=57109 | |gene_id=57109 | ||
| Line 26: | Line 27: | ||
|species=human | |species=human | ||
|start=133417966 | |start=133417966 | ||
| + | |start_of_center_position=133417982 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000454825.1 uc064wvi.1 BC009274 AK310164 | |transcript_name=ENST00000454825.1 uc064wvi.1 BC009274 AK310164 | ||
Revision as of 14:59, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 133417982 |
|---|---|
| End of the center position in the TSS region: | 133417983 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000454825.1 uc064wvi.1 BC009274 AK310164 |
|---|---|
| Distance: | 0 |
| Num_trans: | 32 |
| All_trans: | ENST00000454825.1:0 uc064wvi.1:0 BC009274:0 AK310164:0 ENST00000478037.1:8 uc064wvk.1:8 AK315904:-11 AK314333:-11 BC071691:12 AK304547:-12 ENST00000494045.5:13 uc064wvj.1:13 AK025493:22 AL136894:-28 ENST00000371942.7:-45 uc004cdm.5:-45 AF273304:-45 AF295774:-45 ENST00000371935.6:-97 NM_020385:-97 NM_001279350:-97 NM_001279349:-97 NR_103996:-97 NR_103995:-97 uc033dkm.2:-97 AM392617:119 DQ891911:123 KJ899305:123 DQ895096:123 CU679283:123 NM_001279351:-173 AK295982:-173 |
TATA-Box annotation
| Distance to TSS: | 113 |
|---|---|
| Nearest PromoterID: | NR_103996 |
| Entrez ID: | 57109 |
| Nearest Unigene: | Hs.438409 |
| Nearest Refseq: | NM_020385 |
| Nearest Ensembl: | ENSG00000148300 |
| Gene Name: | "REX4 homolog, 3'-5' exonuclease" |
| Gene Alias: | REX4 |
| Gene Description: | "REX4 homolog, 3'-5' exonuclease" |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
