Difference between revisions of "TSS:Hg 103002.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=54 | |distance_to_tss=54 | ||
|end=133418047 | |end=133418047 | ||
| + | |end_of_center_position=133418042 | ||
|entrez_id=57109 | |entrez_id=57109 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias=REX4 | + | |gene_alias=REX4 |
|gene_description="REX4 homolog, 3'-5' exonuclease" | |gene_description="REX4 homolog, 3'-5' exonuclease" | ||
|gene_id=57109 | |gene_id=57109 | ||
| Line 26: | Line 27: | ||
|species=human | |species=human | ||
|start=133418036 | |start=133418036 | ||
| + | |start_of_center_position=133418041 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000371942.7 uc004cdm.5 AF273304 AF295774 | |transcript_name=ENST00000371942.7 uc004cdm.5 AF273304 AF295774 | ||
Revision as of 14:59, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 133418041 |
|---|---|
| End of the center position in the TSS region: | 133418042 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000371942.7 uc004cdm.5 AF273304 AF295774 |
|---|---|
| Distance: | 0 |
| Num_trans: | 32 |
| All_trans: | ENST00000371942.7:0 uc004cdm.5:0 AF273304:0 AF295774:0 AL136894:10 AK304547:26 AK315904:27 AK314333:27 BC009274:38 AK310164:38 ENST00000371935.6:-49 NM_020385:-49 NM_001279350:-49 NM_001279349:-49 NR_103996:-49 NR_103995:-49 uc033dkm.2:-49 ENST00000454825.1:60 uc064wvi.1:60 ENST00000478037.1:78 uc064wvk.1:78 BC071691:82 ENST00000494045.5:83 uc064wvj.1:83 AK025493:92 NM_001279351:-125 AK295982:-125 AM392617:189 DQ891911:193 KJ899305:193 DQ895096:193 CU679283:193 |
TATA-Box annotation
| Distance to TSS: | 54 |
|---|---|
| Nearest PromoterID: | NR_103996 |
| Entrez ID: | 57109 |
| Nearest Unigene: | Hs.438409 |
| Nearest Refseq: | NM_020385 |
| Nearest Ensembl: | ENSG00000148300 |
| Gene Name: | "REX4 homolog, 3'-5' exonuclease" |
| Gene Alias: | REX4 |
| Gene Description: | "REX4 homolog, 3'-5' exonuclease" |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
