Difference between revisions of "TSS:Hg 103093.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=44 | |distance_to_tss=44 | ||
|end=135499895 | |end=135499895 | ||
| + | |end_of_center_position=135499871 | ||
|entrez_id=138162 | |entrez_id=138162 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| − | |gene_alias=PIERCE1 | + | |gene_alias=PIERCE1 |
|gene_description=chromosome 9 open reading frame 116 | |gene_description=chromosome 9 open reading frame 116 | ||
|gene_id=138162 | |gene_id=138162 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=135499846 | |start=135499846 | ||
| + | |start_of_center_position=135499870 | ||
|strand=- | |strand=- | ||
|tata_box="-76(GCGCCTTTAAGG,-,0.00),-75(CGCCTTTAAGGC,-,0.00),-74(GCCTTTAAGGCC,+,0.00),-73(CCTTTAAGGCCC,+,0.00)" | |tata_box="-76(GCGCCTTTAAGG,-,0.00),-75(CGCCTTTAAGGC,-,0.00),-74(GCCTTTAAGGCC,+,0.00),-73(CCTTTAAGGCCC,+,0.00)" | ||
Revision as of 15:23, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 135499870 |
|---|---|
| End of the center position in the TSS region: | 135499871 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000429260.6 uc004cft.2 AY927868 KJ895521 DQ892784 DQ896031 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENST00000429260.6:0 uc004cft.2:0 AY927868:0 KJ895521:0 DQ892784:0 DQ896031:0 NM_144654:-20 NM_001048265:-20 ENST00000419770.1:329 uc064wys.1:329 |
TATA-Box annotation
| Distance to TSS: | 44 |
|---|---|
| Nearest PromoterID: | NM_144654 |
| Entrez ID: | 138162 |
| Nearest Unigene: | Hs.414028 |
| Nearest Refseq: | NM_144654 |
| Nearest Ensembl: | ENSG00000160345 |
| Gene Name: | chromosome 9 open reading frame 116 |
| Gene Alias: | PIERCE1 |
| Gene Description: | chromosome 9 open reading frame 116 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-76(GCGCCTTTAAGG,-,0.00),-75(CGCCTTTAAGGC,-,0.00),-74(GCCTTTAAGGCC,+,0.00),-73(CCTTTAAGGCCC,+,0.00)" |
