Difference between revisions of "TSS:Hg 103130.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=9448 | |distance_to_tss=9448 | ||
|end=136193738 | |end=136193738 | ||
| + | |end_of_center_position=136193725 | ||
|entrez_id=8022 | |entrez_id=8022 | ||
|gc_percent=0.776119 | |gc_percent=0.776119 | ||
| − | |gene_alias=CPHD3 | + | |gene_alias=CPHD3 |
|gene_description=LIM homeobox 3 | |gene_description=LIM homeobox 3 | ||
|gene_id=100652835 | |gene_id=100652835 | ||
| Line 26: | Line 27: | ||
|species=human | |species=human | ||
|start=136193711 | |start=136193711 | ||
| + | |start_of_center_position=136193724 | ||
|strand=- | |strand=- | ||
|tata_box="-40(CCTTTTAGGCGC,+,0.00)" | |tata_box="-40(CCTTTTAGGCGC,+,0.00)" | ||
Revision as of 15:32, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 136193724 |
|---|---|
| End of the center position in the TSS region: | 136193725 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AB593129 |
|---|---|
| Distance: | 76 |
| Num_trans: | 3 |
| All_trans: | AB593129:76 AB593131:90 AB593130:114 |
TATA-Box annotation
| Distance to TSS: | 9448 |
|---|---|
| Nearest PromoterID: | NM_014564 |
| Entrez ID: | 8022 |
| Nearest Unigene: | Hs.148427 |
| Nearest Refseq: | NM_014564 |
| Nearest Ensembl: | ENSG00000107187 |
| Gene Name: | retinoblastoma-specific gene 2 |
| Gene Alias: | CPHD3 |
| Gene Description: | LIM homeobox 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-40(CCTTTTAGGCGC,+,0.00)" |
