Difference between revisions of "TSS:Hg 103203.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=4 | |distance_to_tss=4 | ||
|end=136748531 | |end=136748531 | ||
| + | |end_of_center_position=136748524 | ||
|entrez_id=158062 | |entrez_id=158062 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=LCN5 | + | |gene_alias=LCN5 |
|gene_description=lipocalin 6 | |gene_description=lipocalin 6 | ||
|gene_id=158062 | |gene_id=158062 | ||
| Line 26: | Line 27: | ||
|species=human | |species=human | ||
|start=136748516 | |start=136748516 | ||
| + | |start_of_center_position=136748523 | ||
|strand=- | |strand=- | ||
|tata_box="-32(CCATATAAACGG,+,0.00)" | |tata_box="-32(CCATATAAACGG,+,0.00)" | ||
Revision as of 15:46, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 136748523 |
|---|---|
| End of the center position in the TSS region: | 136748524 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000341206.8 NM_198946 uc004ciy.4 BC062746 AF303084 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | ENST00000341206.8:0 NM_198946:0 uc004ciy.4:0 BC062746:0 AF303084:0 AY358598:9 HQ257933:33 AY301269:34 KJ900325:34 ENST00000435202.5:64 uc064xdi.1:64 BC026910:64 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_198946 |
| Entrez ID: | 158062 |
| Nearest Unigene: | Hs.522504 |
| Nearest Refseq: | NM_198946 |
| Nearest Ensembl: | ENSG00000204003 |
| Gene Name: | lipocalin 6 |
| Gene Alias: | LCN5 |
| Gene Description: | lipocalin 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-32(CCATATAAACGG,+,0.00)" |
