Difference between revisions of "TSS:Hg 231662.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000371688.7:-70 uc004cjb.2:-70 BC130465:-78 BC132714:-78 NM_178469:-123 AK126902:-123 BC042109:-132 HQ258567:221 KJ895524:221 ENST00000612714.1:-3...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |LCN5= | ||
|all_trans=ENST00000371688.7:-70 uc004cjb.2:-70 BC130465:-78 BC132714:-78 NM_178469:-123 AK126902:-123 BC042109:-132 HQ258567:221 KJ895524:221 ENST00000612714.1:-387 uc064xdu.1:-387 AY301268:-387 | |all_trans=ENST00000371688.7:-70 uc004cjb.2:-70 BC130465:-78 BC132714:-78 NM_178469:-123 AK126902:-123 BC042109:-132 HQ258567:221 KJ895524:221 ENST00000612714.1:-387 uc064xdu.1:-387 AY301268:-387 | ||
|chr=chr9 | |chr=chr9 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=125 | |distance_to_tss=125 | ||
|end=136758156 | |end=136758156 | ||
| + | |end_of_center_position=136758155 | ||
|entrez_id=138307 | |entrez_id=138307 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias=EP17 | + | |gene_alias=EP17 |
|gene_description=lipocalin 8 | |gene_description=lipocalin 8 | ||
|gene_id=138307 | |gene_id=138307 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=136758152 | |start=136758152 | ||
| + | |start_of_center_position=136758154 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000371688.7 uc004cjb.2 | |transcript_name=ENST00000371688.7 uc004cjb.2 | ||
Revision as of 15:47, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 136758154 |
|---|---|
| End of the center position in the TSS region: | 136758155 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000371688.7 uc004cjb.2 |
|---|---|
| Distance: | -70 |
| Num_trans: | 12 |
| All_trans: | ENST00000371688.7:-70 uc004cjb.2:-70 BC130465:-78 BC132714:-78 NM_178469:-123 AK126902:-123 BC042109:-132 HQ258567:221 KJ895524:221 ENST00000612714.1:-387 uc064xdu.1:-387 AY301268:-387 |
TATA-Box annotation
| Distance to TSS: | 125 |
|---|---|
| Nearest PromoterID: | NM_178469 |
| Entrez ID: | 138307 |
| Nearest Unigene: | Hs.323991 |
| Nearest Refseq: | NM_178469 |
| Nearest Ensembl: | ENSG00000204001 |
| Gene Name: | lipocalin 8 |
| Gene Alias: | EP17 |
| Gene Description: | lipocalin 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
