Difference between revisions of "TSS:Hg 219965.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=DQ891577:0 DQ894770:0 KJ892605:1 BT009863:2 CR541914:2 AB590058:-2 ENST00000371648.4:-6 uc004cju.3:-6 AB002282:-8 AB002283:-8 ENST00000371649.5:-25 uc02...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |EDF-1= | ||
| + | |MBF1= | ||
|all_trans=DQ891577:0 DQ894770:0 KJ892605:1 BT009863:2 CR541914:2 AB590058:-2 ENST00000371648.4:-6 uc004cju.3:-6 AB002282:-8 AB002283:-8 ENST00000371649.5:-25 uc022bpv.3:-25 AJ005259:-25 ENST00000224073.5:-26 uc004cjt.3:-26 BC015500:-26 NM_003792:-76 NM_001281299:-76 NM_001281298:-76 NM_001281297:-76 NM_153200:-76 | |all_trans=DQ891577:0 DQ894770:0 KJ892605:1 BT009863:2 CR541914:2 AB590058:-2 ENST00000371648.4:-6 uc004cju.3:-6 AB002282:-8 AB002283:-8 ENST00000371649.5:-25 uc022bpv.3:-25 AJ005259:-25 ENST00000224073.5:-26 uc004cjt.3:-26 BC015500:-26 NM_003792:-76 NM_001281299:-76 NM_001281298:-76 NM_001281297:-76 NM_153200:-76 | ||
|chr=chr9 | |chr=chr9 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=76 | |distance_to_tss=76 | ||
|end=136866260 | |end=136866260 | ||
| + | |end_of_center_position=136866260 | ||
|entrez_id=8721 | |entrez_id=8721 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=CFAP280 | + | |gene_alias=CFAP280 |
|gene_description=endothelial differentiation related factor 1 | |gene_description=endothelial differentiation related factor 1 | ||
|gene_id=8721 | |gene_id=8721 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=136866259 | |start=136866259 | ||
| + | |start_of_center_position=136866259 | ||
|strand=- | |strand=- | ||
|transcript_name=DQ891577 DQ894770 | |transcript_name=DQ891577 DQ894770 | ||
Revision as of 15:53, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 136866259 |
|---|---|
| End of the center position in the TSS region: | 136866260 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | DQ891577 DQ894770 |
|---|---|
| Distance: | 0 |
| Num_trans: | 21 |
| All_trans: | DQ891577:0 DQ894770:0 KJ892605:1 BT009863:2 CR541914:2 AB590058:-2 ENST00000371648.4:-6 uc004cju.3:-6 AB002282:-8 AB002283:-8 ENST00000371649.5:-25 uc022bpv.3:-25 AJ005259:-25 ENST00000224073.5:-26 uc004cjt.3:-26 BC015500:-26 NM_003792:-76 NM_001281299:-76 NM_001281298:-76 NM_001281297:-76 NM_153200:-76 |
TATA-Box annotation
| Distance to TSS: | 76 |
|---|---|
| Nearest PromoterID: | NM_153200 |
| Entrez ID: | 8721 |
| Nearest Unigene: | Hs.174050 |
| Nearest Refseq: | NM_003792 |
| Nearest Ensembl: | ENSG00000107223 |
| Gene Name: | endothelial differentiation related factor 1 |
| Gene Alias: | CFAP280 |
| Gene Description: | endothelial differentiation related factor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
