Difference between revisions of "TSS:Hg 103232.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=53 | |distance_to_tss=53 | ||
|end=136866288 | |end=136866288 | ||
| + | |end_of_center_position=136866283 | ||
|entrez_id=8721 | |entrez_id=8721 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| − | |gene_alias=CFAP280 | + | |gene_alias=CFAP280 |
|gene_description=endothelial differentiation related factor 1 | |gene_description=endothelial differentiation related factor 1 | ||
|gene_id=8721 | |gene_id=8721 | ||
| Line 26: | Line 27: | ||
|species=human | |species=human | ||
|start=136866277 | |start=136866277 | ||
| + | |start_of_center_position=136866282 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000371649.5 ENST00000224073.5 uc022bpv.3 uc004cjt.3 AJ005259 BC015500 | |transcript_name=ENST00000371649.5 ENST00000224073.5 uc022bpv.3 uc004cjt.3 AJ005259 BC015500 | ||
Revision as of 15:53, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 136866282 |
|---|---|
| End of the center position in the TSS region: | 136866283 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000371649.5 ENST00000224073.5 uc022bpv.3 uc004cjt.3 AJ005259 BC015500 |
|---|---|
| Distance: | 0 |
| Num_trans: | 21 |
| All_trans: | ENST00000371649.5:0 ENST00000224073.5:0 uc022bpv.3:0 uc004cjt.3:0 AJ005259:0 BC015500:0 AB002282:10 AB002283:10 ENST00000371648.4:12 uc004cju.3:12 AB590058:16 DQ891577:18 DQ894770:18 KJ892605:19 BT009863:20 CR541914:20 NM_003792:-48 NM_001281299:-48 NM_001281298:-48 NM_001281297:-48 NM_153200:-48 |
TATA-Box annotation
| Distance to TSS: | 53 |
|---|---|
| Nearest PromoterID: | NM_153200 |
| Entrez ID: | 8721 |
| Nearest Unigene: | Hs.174050 |
| Nearest Refseq: | NM_003792 |
| Nearest Ensembl: | ENSG00000107223 |
| Gene Name: | endothelial differentiation related factor 1 |
| Gene Alias: | CFAP280 |
| Gene Description: | endothelial differentiation related factor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
