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Difference between revisions of "TSS:Hg 103246.1"

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Line 6: Line 6:
 
|distance_to_tss=-31
 
|distance_to_tss=-31
 
|end=136944788
 
|end=136944788
 +
|end_of_center_position=136944785
 
|entrez_id=54461
 
|entrez_id=54461
 
|gc_percent=0.746269
 
|gc_percent=0.746269
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=136944781
 
|start=136944781
 +
|start_of_center_position=136944784
 
|strand=-
 
|strand=-
 
|transcript_name=NM_018998
 
|transcript_name=NM_018998

Revision as of 15:55, 11 May 2019

Basic information about the TSS


TSS ID:hg_103246.1
Species:human
Chr:chr9
TSS Classification:yes
Start:136944781
End:136944788
Strand:-
TSS Score:1
Start of the center position in the TSS region:136944784
End of the center position in the TSS region:136944785



Gene and protein annotation


Transcript_name:NM_018998
Distance:28
GeneID:54461
HGNC/MGI_ID:HGNC:13613
UniProt_ID:Q969U6
Gene_name:F-box and WD repeat domain containing 5
Gene_symbol:FBXW5
Gene_synonyms:DKFZP434B205 Fbw5 MGC20962
Gene_source:HGNC:13613



Transcript annotation


Transcript_name:NM_018998
Distance:28
Num_trans:19
All_trans:NM_018998:28 ENST00000459905.5:86 uc064xfo.1:86 BC031100:86 ENST00000483559.5:94 uc064xfn.1:94 BC035355:94 ENST00000428398.5:95 uc064xfr.1:95 ENST00000325285.7:132 uc004cjx.4:132 BC014130:132 AK315738:153 BC014297:161 ENST00000491246.4:162 uc064xfq.1:162 AK026081:164 ENST00000443788.1:248 uc064xfs.1:248



TATA-Box annotation


Distance to TSS:-31
Nearest PromoterID:NM_018998
Entrez ID:54461
Nearest Unigene:Hs.522507
Nearest Refseq:NM_018998
Nearest Ensembl:ENSG00000159069
Gene Name:F-box and WD repeat domain containing 5
Gene Alias:Fbw5
Gene Description:F-box and WD repeat domain containing 5
Gene Type:protein-coding
CpG%:0.145
GC%:0.746269
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):