Difference between revisions of "TSS:Hg 103280.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.045 |distance_to_tss=-3274 |entrez_id=401563 |gc_percent=0.646766 |gene_alias=- |gene_description=chromosome 9 open reading frame 139 |gene_name=C9o...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC072437:459 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| + | |distance=459 | ||
|distance_to_tss=-3274 | |distance_to_tss=-3274 | ||
| + | |end=137024196 | ||
| + | |end_of_center_position=137024191 | ||
|entrez_id=401563 | |entrez_id=401563 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_207511 | |nearest_refseq=NM_207511 | ||
|nearest_unigene=Hs.522509 | |nearest_unigene=Hs.522509 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=137024184 | ||
| + | |start_of_center_position=137024190 | ||
| + | |strand=- | ||
| + | |transcript_name=BC072437 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103280.1 | |tss_id=hg_103280.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:02, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 137024190 |
|---|---|
| End of the center position in the TSS region: | 137024191 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC072437 |
|---|---|
| Distance: | 459 |
| Num_trans: | 1 |
| All_trans: | BC072437:459 |
TATA-Box annotation
| Distance to TSS: | -3274 |
|---|---|
| Nearest PromoterID: | NM_207511 |
| Entrez ID: | 401563 |
| Nearest Unigene: | Hs.522509 |
| Nearest Refseq: | NM_207511 |
| Nearest Ensembl: | |
| Gene Name: | C9orf139 |
| Gene Alias: | - |
| Gene Description: | chromosome 9 open reading frame 139 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
